Component

Break point begin-end

Major Parent

Minor parent

RDP

GENECOV

Max Chi

Chimera

Si Scan

3Seq

Homologous
DNA-A

20-76
2314-19
129-1161
531-1158
1543-2313

TbCSV-[IN:SF1:10][HQ407395]
MYMV-[IN:Har:01][AY271896]
ToLCJoV-[India:Pon:Kenaf:07][FJ345402]
TbLCYnV-[CN:Yn161:Tom:03][AJ566744]
AEV-[IN:HP:09][FN543099]

TbLCTHV-[TH:06][DQ871221]
AEV-[PK:Turnip:07][AM701770]
TbCSV-[IN:ND:Tom:11] [JN387045]
AEV-[PK:Turnip:07][AM701770]
TbLCYnV-[CN:Yn136:02][AJ512761]

2.826×10-5
1.496×10-6
NS
2.497×10-17
NS

4.817×10-5
NS
4.03×10-2
9.751X10-24
3.833×10-3

8.374×10-3
NS
NS
9.369×10-2
1.224×10-2

NS
NS
NS
9.875×10-9
NS

NS
1.898×10-3
NS
8.197×10-37
9.819×10-9

1.588×10-2
8.054×10-5
1.34×10-3
2.467×10-9
1.812×10-2

Betasatellite

119-307

CroYVMB-[IN:Luc:08] EU604296

TYLCCNB-[CN:Y281:08]AM980512

NS

NS

4.309×10-2

9.999×10-1

NS

NS

NS-Non significance
Table 4: Breakpoint analysis of TbCSV-FB01and associated betasatellite, with their putative parental sequences.