Primer identification |
Nucleotide sequence (5’→3’) |
G+C content (%) |
ISSR 5 |
ACG ACGACGACG AC |
64.29 |
ISSR 6 |
TTG TTGTTGTTGTTG GB |
35.29 |
ISSR 9 |
GAT CGA TCG ATC GC |
57.14 |
ISSR 10 |
CTT CTTCTTCTTCTT CCT CCTCCTCCTCCTCCT CT |
51.43 |
17899A |
CAC ACA CAC ACA AG |
50.00 |
17898B |
CAC ACA CAC ACA GT |
50.00 |
UBC 825 |
ACA CAC ACA CAC ACA CT |
47.06 |
UBC 827 |
ACA CAC ACA CAC ACA CG |
52.94 |
UBC 841 |
GAA GGA GAG AGA GAG AYC |
50.00 |
UBC 849 |
GTG TGT GTG TGT GTG TYA |
44.44 |
|
Possible nucleotides for base B are C, G or T and for base Y are C or T. |
Table 1: ISSR primers used for amplification of DNA from Betula papyrifera (white birch), Quercus rubra (red oak) and Acer rubrum (red maple) tree samples from eroded/disturbed, stable upland and reference sites from GSR. |