Psychosis f-PG≥5.6 Psychosis f-PG<5.6 SDPP controls        
  Gene SNP Minor/major allele (aa/ab/bb)% (aa/ab/bb)% (aa/ab/bb)% Allelea OR [95% CI]b Pc BH FDRd
Psychosis f-PG ≥5.6 vs Psychosis f-PG <5.6 IGF2BP2 rs4402960 T/G 8/45/47 13/48/39 12/40/48 G 1.39 [1.05-1.74] 0.019 0.76
Psychosis f-PG ≥5.6 vs SDPP controls NOTCH2 rs10923931 T/G 2/19/79 1/15/84 0/15/85 T 1.84 [1.13-2.46] 0.011 0.18
  THADA rs7578597 C/T 2/11/87 <1/16/83 <1/19/80 T 1.81 [1.00-2.26] 0.014 0.18
  WFS1 rs10010131 A/G 19/42/39 17/50/33 20/48/32 G 1.40 [1.03-1.69] 0.010 0.18
  P2RX7 rs1718119 A/G 11/43/46 19/45/36 19/46/35 G  1.38 [1.21-1.89] 0.014 0.18
  MTNR1B rs10830963 G/C 10/42/48 8/37/55 6/34/60 G 1.51 [1.16-1.89] 0.0039 0.17
aAllele associated with elevated fasting glucose in psychosis patients
bOR calculated for the allele associated with hyperglycemia in psychosis patients
cAdjusted for age, gender, smoking, waist circumference, and family history of diabetes
dBenjamin Hochberg False discovery rate correction
Table 2: Allelic association with metabolic risk genes in psychosis patients with elevated fasting glucose, f-PG≥5.6 compared to psychosis patients with normal fasting plasma glucose (f-PG<5.6) and to SDPP controls.