Hydrolysis agent Hydrolysis Conditions Additives Specific
Determination
6 M HCl 110°C, 24 h 0.02% Phenol All residues except of Cys, Trp
6 M HCl or 4 M MSA 110°C, 24 h 0.2% Sodium azide Cys
6 M HCl 110°C, 18 h 5% Thioglycolic acid, 0.1% phenol, 3,3’-dithiodipropionic acid Cys
6 M HCl   3-Bromopropylamine Cys
6 M HCl 145°C, 4 h Samples previously oxidized with performic acid Cys, Met, Lys
4 M MSA   3-(2-aminoethyl)indole Trp, Methionine sulfoxide
4 M MSA 115°C, 22 h Samples previously alkylated, tryptamine All residues
4 M MSA 160°C, 45 min   All residues
4 M MSA or 5.7 M HCl 150°C, 90 min Oxidation with performic acid All residues
50°C, 10 min
3 M p-Toluenesulfonic acid     Methionine sulfoxide
12 M HCl–propionic acid (1:1) 150°C, 90 min   Resin-bound peptides
12 M HCl–propionic acid (1:1) 840 W, 1–7 min microwave   Resin-bound peptides
p-Toluenesulfonic acid 15 min, microwave    
DCl medium power, 30 min microwave   Sensitive residues
2.5 M Mercaptoethanesulfonic acid 176°C, 12.5 min S-Pyridylethylated samples Cys, Trp
6 M HCl–TFA (6:3) 120°C, 16 h Dithiodiglycolic acid, 1% phenol Cys
HCl   Thioglycolic acid Trp
HCl 110°C, 24 h 0.4% β- Mercaptoethanol Trp
HCl 166°C, 25 min or 145°C, 4 h 3% Phenol Trp
HCl 145°C, 4 h Tryptamine Trp
6 M HCl 145°C, 4 h gas phase Tryptamine[3-(2-aminoethyl)]indole Trp
TFA–HCl (1:2) 166°C, 25-50 min 5% Thioglycolic acid Trp, Met
7 M HCl, 10% TFA   10% Thioglycolic acid, indole Trp
Table 16: Hydrolysis agents of protein hydrolysis [110].