Sample

47 kDa gene (accession #)

Geographic location

Diagnosis* (strain)

L1

+ (L31934)

New Guinea

ST (KARP)1

L2

+ (L31933)

Burma

ST (GILLIAM)2

L3

+ (L31933)

Burma

ST (GILLIAM)

L4

+ (L31934)

New Guinea

ST (KARP)

L5

+ (L31934)

New Guinea

ST (KARP)

L6

+ (L11697)

Japan

ST (KATO)3

L7

+ (HM595490)

Thailand

ST (TA763)4

L8

- (L11697)

Japan

ST (KATO)

L9

+ (L11697)

Japan

ST (KATO)

L10

+ (L31934)

New Guinea

ST (KARP)

L11

 (-)

 

MT

L12

 (-)

 

MT

L13

 (-)

 

LEPTO.

L14

 (-)

 

LEPTO.

L15

 (+)

 

MALARIA(PF)

L16

 (-)

 

MALARIA(PF)

L17

 (-)

 

DENGUE

L18

 (-)

 

DENGUE

L19

 (-)

 

HEALTHY

L20

 (+)

 

HEALTHY

*. ST: scrub typhus; MT: murine typhus.
1,Kim,I.J., Kim,I.S., Choi,I.H., Chang,W.H. and Choi,M.S.
Direct deposited to NCBI database, Apr 18, 1994.
2.Kim I.J. Direct deposited to NCBI database, Mar 11, 1996.
3.Kim I.J. Direct deposited to NCBI database, Mar 11, 1996.
4. Jiang,J., Newton,P.N., Phetsouvanh,R., Izzard,L., Stenos,J., Graves,S.R., Hu,X.,
Wallqvist,A., Ge,H., Day,N.P.J., Richards,A.L.,Blacksell,S.D., Paris,D.H. and
Aukkanit,N. Direct deposited to NCBI database Jul 25, 2011.
Table 3: Evaluation of LAMP assay using the 47 kDa gene as the target with PCR confirmed positive and negative samples.