| Patient |
Age |
Culture-dependant screen |
Taxa contributing to > 5% of microbiota |
Microbial biomass (ng/µl) |
| RSV positive |
0540 |
1 month |
Gammaproteobacteria |
Staphylococcus (77.67) |
338.77 |
| 8213 |
2 months |
negative |
Enterobacteriaceae (50.67)
Leclercia (45.50) |
0.51 |
| 2921 |
2 months |
Klebsiella sp |
Prevotella (28.83)
Haemophilus (22.67)
Stenotrophomonas (12.17)
Streptococcus (11.67) |
0.29 |
| 9636 |
4 months |
negative |
Haemophilus (48.67)
Flavobacteriaceae (17.83)
Diaphorobacter (7.50) |
0.41 |
| 0908 |
9 months |
M. catarrhalis |
Moraxella (92.33) |
13.98 |
| 1002 |
11 months |
S. aureus |
Streptococcus (54.00)
Veillonella (11.50)
Gemella (9.00) |
0.87 |
| 5582 |
1 year |
S. pneumoniae + M. catarrhalis |
Streptococcus (93.50) |
18.86 |
| 9851 |
2 years,
9 months |
S. pneumoniae + E. faecalis |
Neisseria (18.67)
Pseudomonas (17.17)
Enterococcus (14.00)
Streptococcus (11.00)
Fusobacterium (5.50)
Stenotrophomonas (5.00) |
0.84 |
| 5149 |
2 years
9 months |
M. catarrhalis + Klebsiella sp |
Moraxella (87.33) |
26.06 |
| 4323 |
3 years |
M. catarrhalis |
Moraxella (39.83)
Enterobacteriaceae (28.83)
Leclercia (23.00) |
2.83 |
| HRV positive |
4543 |
3 months |
Negative |
Stenotrophomonas (30.83)
Flavobacteriaceae (26.17)
Diaphorobacter (11.17)
Idiomarinaceae (8.50) |
0.27 |
| 4362 |
4 months |
S. aureus |
Staphylococcus (94.67) |
136.37 |
| 6594 |
6 months |
S. aureus + S. mitis |
Streptococcus (54.33)
Gemella (11.67)
Prevotella (5.83) |
1.86 |
| 3456 |
7 months |
Negative |
Flavobacteriaceae (24.33)
Stenotrophomonas (15.67)
Diaphorobacter (14.83)
Moraxella (14.00)
Idiomarinaceae (12.33) |
0.46 |
| 3374 |
7 months |
S. pneumoniae + M. catarrhalis |
Streptococcus (65.17)
Moraxella (21.83) |
1.68 |
| 9428 |
10 months |
M. catarrhalis |
Moraxella (81.67) |
52.63 |
| 3066 |
1 year,
8 months |
E. coli |
Carnobacteriaceae (80.33) |
0.85 |
| 2144 |
1 year,
11 months |
M. catarrhalis |
Moraxella (93.33) |
236.36 |
| 4308 |
2 years,
10 months |
S. dysgalactiae + Rothia sp |
Neisseria (54.50)
Haemophilus (9.83)
Fusobacterium (8.17) |
32.72 |
| 2110 |
3 years |
Negative |
Flavobacteriaceae (19.67)
Stenotrophomonas (17.17)
Staphylococcus (14.50)
Diaphorobacter (13.33)
Idiomarinaceae (7.67) |
0.44 |
| Virus-negative |
5110 |
1 month |
negative |
Haemophilus (33.00)
Staphylococcus (30.50)
Streptococcus (24.17) |
3.56 |
| 9905 |
1 month |
negative |
Streptococcus (65.67)
Prevotella (15.67) |
0.71 |
| 7569 |
1 month |
S. pneumoniae + M. catarrhalis |
Streptococcus (49.00)
Moraxella (29.33) |
6.67 |
| 8664 |
2 months |
S. aureus |
Corynebacterium (95.50) |
3.74 |
| 9360 |
2 months |
Enterobacter sp |
Leclercia (89.33) |
159.64 |
| 0734 |
2 months |
S. maltophilia |
Acinetobacter (84.17) |
5.89 |
| 1742 |
4 months |
negative |
Moraxella (89.33) |
34.16 |
| 1276 |
1 year,
4 months |
negative |
Streptococcus (71.00) |
0.46 |
| 5784 |
4 years,
5 months |
S. aureus |
Staphylococcus (40.17)
Carnobacteriaceae (28.17)
Streptococcus (12.00) |
3.19 |
