| Cell cycle genes |
Cell cycle checkpoints: Ccna1, Ccnc, Ccnd1, Ccne1, Cdk2, Cell cycle arrest: Cdkn1a, Cdkn1b, Cdkn2a, Ddit3, Gadd45a, Rb1 |
| Regulation of cell cycle |
Apc, Atm, Rb1, Brca1, Brca2, Ccnd1, Cdk4, E2f1, Fgf2, Gadd45b, Il1a, Il1b, Mdm2 |
| Apoptosis genes |
Atm, Bax, Bcl2, Myc, Tnf, Brca1, Casp3, Casp7, Casp8, Casp9, Ddit3, Mgmt |
| p53 Pathway |
Bax, Cdkn1a(p21), E2f1, E2f5, Gadd45a, Igfbp3, Mdm2, Tnfrsf6, Tp53 |
| NFkB Pathway |
Icam1, Il2, TNFb, Myc, Nfkb1, Nfkbia, Nos2, Pecam, Tnf (TNFa), Vcam1 |
| Proliferation indicators |
Pcna, Fos, Jun |
| Growth factors |
Fgf1, Fgf2, Egf, Egfr |
| DNA repair genes |
Dhfr, Sod1, Gss |
| Retinoic acid receptors |
Rara, Rarb, Rarg, Rxra, Rxrb, Rxrg, Rbp1, Rbp2, RoDHII, Crabp1, Crabp2, Lrat |
| Other |
Kras, Cox2, c-myc, Vegf, EGF, EGFR, Egr1 |
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