| Chromosome |
Position |
Reference |
Mutation |
Replicate
1 VF |
Coverage |
Replicate 2 VF |
Coverage |
Replicate 3 VF |
Coverage |
| ExamplesofConsistent&NotSo ConsistentVariantCalls |
| 10 |
89685263 |
T |
G |
0.057 |
316 |
0.0379 |
264 |
0.0556 |
198 |
| 10 |
89717775 |
A |
G |
0.1218 |
238 |
0.0798 |
213 |
0.1348 |
141 |
| 10 |
89717778 |
T |
G |
0.0583 |
343 |
0.0769 |
325 |
0.0616 |
211 |
| 11 |
108172364 |
G |
T |
0.1824 |
329 |
0.2424 |
363 |
0.197 |
198 |
| 11 |
108173701 |
T |
G |
0.1498 |
207 |
0.249 |
253 |
0.1882 |
170 |
| 13 |
28608229 |
A |
T |
0.1366 |
227 |
0.0663 |
196 |
0.1319 |
91 |
| 14 |
105241506 |
C |
T |
0.0958 |
428 |
0.0902 |
410 |
0.0569 |
281 |
| 17 |
7578183 |
C |
G |
0.2733 |
344 |
0.4144 |
263 |
0.3564 |
202 |
| 17 |
7578253 |
C |
A |
0.3196 |
388 |
0.3272 |
327 |
0.3156 |
244 |
| 5 |
170837513 |
C |
T |
0.1281 |
203 |
0.115 |
200 |
0.1552 |
116 |
| 7 |
55221793 |
G |
C |
0.1644 |
590 |
0.1473 |
516 |
0.2708 |
240 |
| 7 |
55221802 |
G |
A |
0.0979 |
572 |
0.1931 |
492 |
0.0989 |
263 |
| 20 |
36031767 |
C |
G |
0.1525 |
1167 |
0.27 |
1185 |
0.3556 |
689 |
| 20 |
57484563 |
T |
C |
0.0812 |
579 |
0.112 |
607 |
0.0439 |
387 |
| 20 |
57484566 |
T |
C |
0.0897 |
591 |
0.1086 |
617 |
0.0388 |
387 |
| 22 |
24176307 |
C |
G |
0.0483 |
290 |
0.0383 |
261 |
0.0764 |
157 |
| 4 |
55972974 |
T |
A |
0.5677 |
421 |
0.5861 |
447 |
0.6202 |
258 |
| 4 |
153249356 |
T |
C |
0.1333 |
360 |
0.2216 |
370 |
0.145 |
269 |
| 4 |
153249359 |
C |
A |
0.152 |
375 |
0.2289 |
380 |
0.1786 |
280 |
| 4 |
153249361 |
T |
C |
0.2829 |
205 |
0.3636 |
231 |
0.2911 |
158 |
|