| Sequencing |
Normal |
Deformed |
| Ave. number reads |
44.6 M |
46.1 M |
| Ave. number trimmed reads |
35.3 M |
37.8 M |
| Ave. mapping (%)* |
71.7 |
71.6 |
| DE analysis |
Def. Vs. Norm. |
| Up-regulated in Def. |
700 |
| Down-regulated in Def. |
589 |
| Total |
1 289 |
| Match Uniprot |
793 |
FDR: 5%, triplicates. Unique gene match in Uniprot-Swissprot database (cut-off
evalue<1e-8). Analyses on genes levels expression with both edgeR and DESeq
packages.
*Trimmed reads with at least one reported alignment using RSEM output. |
