| |
TP |
FP |
TN |
FN |
Sn (%) |
Sp (%) |
MCC (%) |
| SignalP |
232 |
329 |
5663 |
9 |
96.3 |
94.5 |
61.2 |
| Phobius |
226 |
203 |
5789 |
15 |
93.8 |
96.6 |
68.8 |
| TargetP |
228 |
583 |
5409 |
13 |
94.6 |
90.3 |
48.6 |
| WolfPsort |
230 |
167 |
5825 |
11 |
95.4 |
97.2 |
73.1 |
| SignalP/TMHMM |
228 |
168 |
5824 |
13 |
94.6 |
97.2 |
72.6 |
| Phobius/TMHMM |
224 |
200 |
5792 |
17 |
92.9 |
96.7 |
68.6 |
| TargetP/TMHMM |
224 |
265 |
5727 |
17 |
92.9 |
95.6 |
63.5 |
| WolfPsort/TMHMM |
227 |
135 |
5857 |
14 |
94.2 |
97.7 |
75.8 |
| SignalP/TMHMM/WolfPsort |
226 |
86 |
5906 |
15 |
93.8 |
98.6 |
81.6 |
| SignalP/TMHMM//WolfPsort/Phobius |
222 |
69 |
5923 |
19 |
92.1 |
98.8 |
83.1 |
| SignalP/TMHMM/WolfPsort/Phobius/PS-Scan |
222 |
67 |
5925 |
19 |
92.1 |
98.9 |
83.4 |
| SignalP/TMHMM/WolfPsort/Phobius/TargetP/PS-Scan |
218 |
66 |
5926 |
23 |
90.5 |
98.9 |
82.6 |
|
TP : true positives; FP: false positives; TN: true negatives; FN: false negatives. Sn: sensitivity; Sp:specificity; MCC: Mathews’ correlation coefficient.
Table 1: Prediction accuracies of secreted proteins in fungi. |
