Allele

Rank

Sequence

Residue No.

Score

Predicted affinity

 

I-Ab

1

IKLYRIEPT

42

1.076

Moderate

2

KALKKRKAV

7

1.001

Moderate

3

IWKMFMLLV

59

0.857

Moderate

4

TTLLRRNVT

135

0.820

Moderate

 

I-Ad

1

LEAPVGGGT

117

0.561

Moderate

2

LDFLYLAFY

145

0.547

Moderate

3

FIWKMFMLL

58

0.496

Low

4

GTSEVECLL

124

0.491

Low

 

I-Ag7

1

CKVRPGRIL

68

1.439

High

2

TVVLEAPGL

91

1.438

High

3

SGELEAPVG

114

1.421

High

4

SHDYAVDTS

26

1.296

High

 

RT1.B

1

TTSHDYAVD

24

0.773

Moderate

2

TSHDYAVDT

25

0.443

Low

3

SKATTSHDY

21

0.434

Low

4

TELDFLYLA

143

0.426

Low

Table 12: Peptide binders of ABTV coat protein to MHC-II molecules.