Hemagglutinin

FTTANADTL

11-19

HLA-A1, A2, A*0201, A*0205, A*1101, A3, A*3101, A*3302, A20, B*2702, B*2705, B*5101, B*5102, B*5301, B*5401, B*51, B60, B61,B7, B8

STDTVDTVL

28-36

HLA-A1, A*1101,  A3, A*3101,  A68.1,  A2.1, B*2702 B*2705,  B*3701, B*3801,  B*3901 B*3902,B*4403,B*5103, B*5201,   B*5801, B60

 

Neuraminidase

TIGMANLIL

15-23

A1, A*0201, A*0205 A*1101, A24, A3, A*3101, A*3302, A68.1, B*3801, B*3901, B*3902, B62, B7, B8

AIYSKDNSV

97-105

 A*0205, A*1101, A3, A*3101, A*3302, A68.1, A2.1,  B*2705, B*5101, B*5102, B*5103, B*5201, B*5401, B62,  B*0702, B8

GQSVVSVKL

76- 84

 A2, A*0201, A*0205, A*1101, A24, A3, A*3101,   A20 Cattle, A2.1, B*2702, B*2705, B*3701, B*3801,  B*3902, B40, B*5102, B*5201, B*5401, B60, B62, B7

 

Polymerase PA

KLLLIVQAL

663-671

A2, A*0201, A*0205, A*1101, A24, A3, A*3101,  A2.1, B14, B*2702, B*2705, B*3501, B*5102, B*3901,B62, B*0702

FLLMDALKL

281-289

A2, A*0201, A*0205 A*1101, A3, A*3101, A2.1,B*5102, B*5301, B*5401, B*51, B62

 

Polymerase PB1

FVANFSMEL

500-509

 A2, A*0201, A*0205, A*1101,A3,A68.1, A2.1, B*5301, B*5401, B*51, B7

STVLGVSIL

415-423

 A2, A*3101, A68.1, B14, B*3901, B40, B*4403, B*5201, B*5801,B60, B62

 

Polymerase PB2

VLTGNLQTL

343-351

 A2, A*0201, A*0205, A3, A2.1,B*3801, B*3901 B62

VVFPNEVGA

165-173

A1, A2, A*0201, A*0205, A*1101, A*3101, A3, A68.1, B*5301, B*5401, B*51

Matrix protein

 

GILGFVFTL

57-65

A2, A*0201, A*0205, A*1101, A24, A3, A*3101,  A2.1, B14, B*2705, B*5101, B*5102, B*5103,  B*5401, B62, B7

NNMDKAVKL

90-98

A*0201, A*0205, A24,B*2705, B*3501, B*3801, B*3901, B*4403, B*5102,B60,B7,B8

Nucleocapsid protein

CLPACVYGL

274-282

A2, A*0201, A*0205,A24, A3, A*3101, A2.1, B14,B*3901, B*3902,B7

FQGRGVFEL

457-465

A*0201, A*0205,A*3101, A2.1,B*2702, B*2705,B*3902, B*5301, B*5401, B*51,B60, B62

Table 2: Selected peptides of H1N1 proteome and their HLA class allele coverage (The given peptides are predicted to bind to the depicted HLA class I molecules, PROPRED I~4%).