S.no

GeneSymbol

Architecture/Domain

Primary localization

Alternate localization

Biological process

Molecular function

Molecule class

+/-

Fold change
TBM/Normal

1

CHI3L2

SP

Nucleus

N/A

Bone remodeling

Molecular function unknown

Unclassified

 

+

58

2

UBD

UBQ

Nucleus

Cytoplasm

Protein metabolism

Ubiquitin-specific protease activity

Ubiquitin proteasome system protein

 

+

56

3

IGL@

IGC; IGV; SP

N/A

N/A

Immune response

Antigen binding

Immunoglobulin

 

+

42.5

4

IGHA2

Ig_LIKE; IGV; SP

N/A

N/A

Immune response

Antigen binding

Immunoglobulin

 

+

40

5

CXCL9

SCY; CC; CXC; SP

Extracellular

N/A

Immune response

Chemokine activity

Chemokine

+

36

6

IGHG1

Ig_LIKE; IGV

N/A

N/A

Immune response

Antigen binding

Immunoglobulin

 

+

32

7

SLAMF8

TM; SP

Plasma membrane

N/A

Immune response

Receptor activity

Cell surface receptor

 

+

24

8

GBP5

CC

N/A

N/A

Cell communication; Signal transduction

GTPase activity

GTPase

 

+

22

9

CARTPT

SP

Extracellular

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

+

20

10

CIITA

LRR

Nucleus

N/A

Immune response

Transcription regulator activity

Transcription regulatory protein

 

+

20

11

LOC100131733

N/A

N/A

N/A

N/A

N/A

N/A

 

+

19

12

APOL6

TM; CC

Cytoplasm

N/A

Metabolism; Energy pathways

Transporter activity

Transport/cargo protein

 

+

18.5

13

CHI3L1

SP

Extracellular

N/A

Cell growth and/or maintenance

Extracellular matrix structural constituent

Extracellular matrix protein

 

+

16

14

IL4I1

SP

N/A

N/A

Apoptosis; Immune response

Catalytic activity

Enzyme: Oxidase

 

+

15

15

SERPINA3

SERPIN; SP

Extracellular

Cytoplasm; Nucleus

Protein metabolism

Protease inhibitor activity

Protease inhibitor

 

+

14

16

MYBPH

FN3; IGC2

Cytoplasm

N/A

Cell growth and/or maintenance

Structural molecule activity

Structural protein

 

+

14

17

SLAMF7

IG; TM; SP

Plasma membrane

N/A

Immune response

Receptor activity

Cell surface receptor

 

+

14

18

IL21R

FN3; TM; SP; WSXWS

Plasma membrane

N/A

Immune response

Transmembrane receptor activity

Cytokine receptor

 

+

13

19

IDO1

N/A

Cytoplasm

N/A

Metabolism; Energy pathways

Catalytic activity

Enzyme: Oxygenase

 

+

13

20

SLC14A1

TM

Plasma membrane

N/A

Transport

Transporter activity

Transport/cargo protein

 

+

13

21

SCIN

GEL

Cytoplasm

Plasma membrane

Cell growth and/or maintenance

Cytoskeletal protein binding

Cytoskeletal associated protein

 

+

11

22

PKD2L1

EF; TM; CC

Plasma membrane

N/A

Transport

Ion channel activity

Ion channel

 

+

11

23

CTAG1A

N/A

N/A

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

+

11

24

TYMP

N/A

Extracellular

Cytoplasm; Nucleus

Cell communication; Signal transduction

Growth factor activity

Growth factor

 

 

+

11

25

LAX1

TM

Integral to membrane

N/A

Cell communication; Signal transduction

Receptor signaling complex scaffold activity

Adapter molecule

 

+

10

26

SPOCD1

TFS2M

N/A

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

+

10

27

CD2

TM; SP

Plasma membrane

N/A

Immune response

Receptor activity

Cell surface receptor

 

+

10

28

TTR

TRANSTHYR; SP

Extracellular

N/A

Transport

Transporter activity

Transport/cargo protein

 

-

23

29

RELN

EGF; SP

Extracellular

N/A

Protein metabolism

Serine-type peptidase activity

Serine protease

 

-

19

30

LYVE1

LINK; TM; SP

Plasma membrane

N/A

Cell communication; Signal transduction

Receptor activity

Cell surface receptor

 

 

-

19

31

DEFA3

SP

Extracellular

N/A

Immune response

Defense/immunity protein activity

Defensin

 

-

15

32

HIAT1

TM

N/A

N/A

Transport

Transporter activity

Transport/cargo protein

 

-

13

33

EXPH5

N/A

Nucleus

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

-

12

34

GLIPR1L2

SCP

N/A

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

-

12

35

TMED7-TICAM2

N/A

N/A

N/A

-

-

-

 

-

12

36

ABHD3

SP

N/A

N/A

Biological_
process unknown

Molecular function unknown

Unclassified

 

-

11

37

CNTN6

FN3; Ig_LIKE; IGC2; SP

N/A

N/A

Cell communication; Signal transduction

Cell adhesion molecule activity

Adhesion molecule

 

-

11

38

C9orf5

TM

N/A

N/A

Biological_
process unknown

Molecular function unknown

Integral membrane protein

 

 

-

11

39

EDNRB

TM; SP

Plasma membrane

Lysosome; Endoplasmic reticulum

Cell communication; Signal transduction

G-protein coupled receptor activity

G protein coupled receptor

 

 

-

11

40

TMCO3

TM; CC; SP

Integral to membrane

N/A

Biological_
process unknown

Molecular function unknown

Integral membrane protein

-

10

41

APPBP2

CC

Cytoplasm

Cytoplasmic vesicle; Golgi apparatus

Regulation of gene expression, epigenetic

Molecular function unknown

Adapter molecule

 

-

10

42

S100A12

N/A

Cytoplasm

N/A

Cell communication; Signal transduction

Calcium ion binding

Calcium binding protein

 

-

10

Note: Positive sign (+) indicates upregulation, Negative sign (-) indicates downregulation and N/A: Not available
Table 1: A partial list of differentially regulated genes expressed in TBM.