Group Comparison (left vs. right) Differential Proteinsa Markers Selecteda
1 India-195/P KIM5 D27 63 6
2 India-195/P NYC 39 8
3 India-195/P PEXU2 154 6
4 KIM5 D27 NYC 109 5
5 KIM5 D27 PEXU2 164 6
6 NYC PEXU2 147 6
7 India-195/P (4mM Ca2+) India-195/P (0mM Ca2+) 10 3
8 KIM5 D27 (4mM Ca2+) KIM5 D27 (0mM Ca2+) 54 6
9 NYC (4mM Ca2+) NYC (0mM Ca2+) 81 9
Totala   323 37
aSpots may be listed as differential among multiple comparisons, but can only be listed once in the total number of proteins. All marker selection groups resulted in 100% accuracy
Table 2: The number of differentially expressed protein spots per group for a direct comparison of the experimental conditions (experimentally-based method).