Pathway Count P-value Proteins Fold Enrichment Bonferroni Benjamini FDR
Oxidative phosphorylation 24 8.09E-11 UQCRC1, ATP6AP1, ATP6V1G1, COX5A, UQCRFS1, COX5B, UQCRQ, UQCRFSL1, NDUFS7, NDUFS6, NDUFS4, ATP5L, ATP6V0D1, ATP5I, NDUFS1, NDUFA5, NDUFA2, ATP5F1, ATP6V1H, ATP6V1F, COX6C, NDUFV1, ATP6V1E1, ATP6V0A1, UQCRB 5.18657 1.00E-08 1.00E-08 9.34E-08
Parkinson’s disease 18 2.00E-06 NDUFA5, NDUFA2, UQCRC1, SLC25A4, ATP5F1, COX5A, VDAC2, UQCRFS1, UQCRQ, COX5B, UQCRFSL1, COX6C, VDAC1, NDUFS7, NDUFS6, NDUFS4, NDUFV1, NDUFS1, UQCRB 3.950708 2.48E-04 1.24E-04 0.00231
Huntington’s disease 19 5.51E-05 NDUFA5, NDUFA2, UQCRC1, SLC25A4, ATP5F1, COX5A, VDAC2, UQCRFS1, UQCRQ, COX5B, UQCRFSL1, COX6C, VDAC1, DCTN2, NDUFS7, NDUFS6, NDUFS4, NDUFV1, NDUFS1, UQCRB 2.96547 0.006812 0.002276 0.063633
Systemic lupus erythematosus 13 1.68E-04 HLA-DRB1, ACTN4, C4A, SNRPD3, ACTN1, HIST1H2BO, TROVE2, HIST1H2BL, HIST1H3A, H2AFY2, SNRPB, H2AFY, H3F3A 3.689101 0.020611 0.005193 0.193756
Vibrio cholerae infection 9 6.99E-04 ACTG1, ACTB, ATP6AP1, ATP6V1E1, ATP6V1H, ATP6V0A1, ATP6V1G1, ATP6V0D1, ATP6V1F 4.515095 0.083065 0.017194 0.804307
Spliceosome 13 0.001537 SNRPA1, SNRPD3, SNRPD2, HNRNPA1, NAA38, SF3B3, HNRNPU, RBM8A, PCBP1, SNRPB, MAGOHB, SNRNP70, SNRPE 2.898579 0.173673 0.031294 1.760801
Cardiac muscle contraction 10 0.001584 ATP1B1, ACTC1, UQCRC1, ATP1A1, UQCRFS1, COX5A, UQCRQ, COX5B, UQCRFSL1, UQCRB, COX6C 3.601785 0.178439 0.027688 1.81371
Alzheimer’s disease 15 0.001737 NDUFA5, NDUFA2, UQCRC1, ATP5F1, COX5A, UQCRFS1, COX5B, UQCRQ, UQCRFSL1, COX6C, NDUFS7, NDUFS6, NDUFS4, NDUFV1, NDUFS1, UQCRB 2.58533 0.193896 0.026583 1.987221
Table 1: Signaling pathways identified by DAVID. The list of significantly differentiating proteins between MCC and carcinoid tumors of the lung was imported into the DAVID functional annotation web-tool. The proteins identified in signaling pathways from the KEGG database are listed.