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Table 2: Wilcoxon-Mann-Whitney two-sample rank sum test applied to screened, quantile-normalized median summarized data from the Nickel Exposure Study. The samples contain 18 subjects with high (≥ 9.98 µg/L) and 18 subjects with low (≤4.44 µg/L) level of urinary Nickel. The meaning of columns are as follows: GID – glycan identification number, Z – z-statistic, p – p-value of the test, FDR – false discovery rate, AUC – area under the ROC curve, AUCC – cumulative AUC value obtained by combining the above glycans through multivariate logistic regression, ICC – corresponding Intra-class Correlation Coefficient computed for raw data. The sign of the z-statistic indicates downregulation (negative sign) or upregulation (positive sign) of normalized signals. The low values of FDR, at least for top three glycans, imply a good confidence in the results. The glycans in the table are sorted by ascending order of the p-value. The sixth column suggests that combining several glycans can considerably increase the AUC value. For example, combining three top glycans: GID = 191, 264, 133, gives AUCC = 0.966. Figure 13 shows a solid statistical significance for this AUC value. |