UniProt Accession No. Gene ID Protein Name   Class 1   Class 2
Mean (SD) Mean (SD)
APOA LPA Apolipoprotein (a) 0.9 (1.2)b 5.8 (7.7)
APOB APOB Apolipoprotein B-100 26.2 (30.1) 79.4 (73.2)
APOH APOH Beta-2-glycoprotein 1   6.8 (5.2) 10.9 (6.7)
CD14 CD14 Monocyte differentiation   0.2 (0.5)   1.9 (1.7)
antigen CD14
CPN2 CPN2 Carboxypeptidase N    1.6 (1.9)   5.9 (6.0)
subunit 2
FA10 F10 Coagulation factor X   0.8 (1.0)   2,9 (3,5)
ITIH2 ITIH2 Inter-alpha-trypsin inhibitor  14.7 (8.7) 32.4 (21,7)
heavy chain H2
MASP1 MASP1 Mannan-binding lectin    0.2 (0.4)   1.0 (0.9)
serine protease 1
PHLD GPLD1 Phosphatidylinositol-glycan-   1.3 (1.5)   3.5 (3.3)
specific phospholipase D
PROP CFP Properdin   2.3 (1.1)   3.4 (1.6)
TETN CLEC3B Tetranectin   2.7 (1.8)   4.9 (1.1)
VTNC VTN Vitronectin   5.7 (2.9) 11.6 (6.2)
aTwelve proteins most frequently observed in the set of 2000 best pairs from 20 runs of 10-fold cross-validation (100 per run).
bMeans and standard deviations (SD) of spectral counts.
Table 3: Most frequently observed individual proteins.a