Pattern 1  ( [FL]-[ILV]-[AV]-F-P-E-[VT]-[FW]-[IL]-P-[GY]-Y-P-[WY] )
S. No   Organism Access. No. Mol wt. Amino Acid No. NCR* Alanine (%) Instability index
1 Uncultured organism Q6RWK6 378791 354 39 16.9 36.02
2 Nocardia sp. Q5D4V8 41971.9 381 51 11.5 30.81
3 Sclerotinia sclerotiorum A7F824 41160.5 368 49 6.8 35.31
4 Nectria haematococa C7YVF8 41018.6 366 53 7.7 33.84
5 Silicibacter pomeroyi Q5LLB2 37226.1 344 44 10.8 35.63
Pattern 2  ( R-R-K-[LI]-[KRI]-[PA]-T-[HY]-[VAH]-E-R )
1 Uncultured organism Q6RWS5 37242.6 345 40 15.4 37.02
2 Uncultured organism Q6RWS0 38048.3 349 36 12.3 35.09
3 Rhodococcus rhodochorus A4LA85 40370.4 366 46 10.9 39.90
4 B.japonicum Q89GE3 36203.3 334 39 13.5 33.69
5 Aspergillus niger. A9QXEO 40022.2 356 49 7.6 30.71
Pattern 3  ( C-W-E-H-[FLX]-[NQ]-[PT]-L )
1 Burkholderia multivorans B9BNU9 37461.8 345 42 11.9 36.48
2 Uncultured organism Q6RWF2 37809.2 344 44 11.0 39.69
3 Uncultured organism Q6RWF9 38029.4 353 40 17.0 37.41
4 Methylibium petroleiphilum A2SEG6 37969.1 357 39 16.0 42.17
5 Paracoccidioides brasiliensis C1H5H4 37871.1 356 39 10.1 37.47
Pattern 4  ( [VA]-A-X-[AV]-Q-[AI]-X-P-[VA]-X-[LF]-[SD] )
1 Rhodococcus rhodochrous Q03217 40189.2 366 46 11.2 39.36
2 Uncultured organism Q6RWK6 37879.1 354 39 16.9 36.02
3 Sphingomonas wittichi B4WRX6 35995.2 334 42 12.6 38.51
4 Silicibacter pomeroyi Q5LLB2 37226.1 344 44 10.8 35.63
5 Providencia alcalifaciens B6XD88 37552.7 343 43 10.8 30.32
Table 3a: In silico analysis of some physiochemical properties of some aliphatic nitrilase (sequences obtained from ScanProsite) from Manually Designed Motif analysis.