MHC ALLELE Rank Sequence Residue No. Peptide Score
I-Ab 1 TASKPRVER 167 0.987
I-Ab 2 TLTAETASK 162 0.856
I-Ab 3 NATYLVTAT 97 0.822
I-Ab 4 RTLXTGHKE 218 0.762
I-Ad 1 MASQLCLIL 1 0.703
I-Ad 2 GSAIVSAIL 234 0.636
I-Ad 3 NATYLVTAT 97 0.632
I-Ad 4 LATAVLASD 10 0.622
I-Ag7 1 FHDAEHEVL 56 1.673
I-Ag7 2 TKTTYAELG 77 1.614
I-Ag7 3 NKDAFHDAE 52 1.591
I-Ag7 4 YLVTATANI 100 1.587
RT1.B 1 TKTTYAELG 77 1.136
RT1.B 2 TTSGSAIVS 231 0.961
RT1.B 3 NTKTTYAEL 76 0.890
RT1.B 4 DGSATLDEL 86 0.836
Table 2: SVM based prediction of promiscuous MHC class II binding peptides from antigen protein.