Table 2

Table 2: Identification of differentially expressed protein between control and transgenic soybean seed variteies
Spot #	Protein	PI #	MOWSE Score	# of PM	Mr (Da)
Spot #	Protein	PI #	MOWSE Score	# of PM	Mr (Da)
1	Beta-conglycinin, alpha chain	gi\|121281	669	7	121281
2	Beta-conglycinin, alpha chain-like [Glycine max]	gi\|356535993	67	1	68392
3	Alpha' subunit of beta-conglycinin [Glycine max]	gi\|9967361	277	2	65160
4	Alpha' subunit of beta-conglycinin [Glycine max]	gi\|9967361	566	6	65160
5	Alpha' subunit of beta-conglycinin [Glycine max]	gi\|9967361	533	6	65160
6	Beta-conglycinin alpha subunit [Glycine max]	gi\|335353923	943	11	70451
7	*Beta-conglycinin beta subunit [Glycine max]	F7J077	1364	18	50442
8	*Beta-conglycinin beta subunit [Glycine max]	F7J077	529	5	50442
9	*Beta-conglycinin beta subunit [Glycine max]	F7J077	1462	20	50442
10	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	299	3	50010
11	Beta-conglycinin beta subunit [Glycine max]	gi\|63852207	1523	19	48358
12	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	906	11	50010
13	Beta-conglycinin beta subunit [Glycine max]	gi\|63852207	881	13	48358
14	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	432	3	50010
15	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	911	12	50010
16	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	172	1	50010
17	Beta-conglycinin beta subunit [Glycine max]	gi\|341603995	908	11	50010
18	Glycinin G1 precursor [Glycine max]	gi\|121276	100	1	56299
19	Glycinin A3B4 [Glycine max]	gi\|225440	521	6	27447
20	Glycinin G1 precursor [Glycine max]	gi\|121276	464	5	56299
21	Glycinin G1 precursor [Glycine max]	gi\|121276	405	5	56299
22	Isoflavone reductase homolog 2 [Glycine max]	gi\|351726399	811	9	33919
23	Isoflavone reductase homolog 2 [Glycine max]	gi\|351726399	826	11	33919
24	Cysteine synthase [Glycine max]	gi\|351727525	858	6	34362
25	*Pv42p [Phaseolus vulgaris]	Q41108	119	1	41312
26	Quinone oxidoreductase-like protein At1g23740	gi\|356571378	180	1	34660
27	*Alcohol dehydrogenase 1 [Glycine max]	Q8LJR2	501	4	40007
28	Nucleoside diphosphate kinase [Glycine max]	gi\|26245395	252	3	16402
29	Peptidyl-prolyl cis-trans isomerase 1 / Cyclophilin 1 [Glycine max]	gi\|75304514	359	4	18395
30	Seed maturation protein PM30 [Glycine max]	gi\|351727184	228	2	15145
* Refers to identity based on BLASTp on resulting sequence from MASCOT

Table 2: Identification of differentially expressed protein between control and transgenic soybean seed variteies