| Strands |
Features |
Gastric edinocarcinoma |
Malt Lymphoma |
Gastritis |
Peptic Ulcers |
| |
|
F32 |
F57 |
HPAG1 |
PaCan4 |
B38 |
F16 |
25595 |
SJM180 |
V225sd |
J99 |
B8 |
G27 |
F30 |
| Forward |
No.of Bases present in CDS |
798816 |
845766 |
839527 |
793743 |
755493 |
827554 |
830877 |
845328 |
830522 |
855024 |
918432 |
833424 |
800451 |
| Gene (ORF’s) |
934 |
979 |
954 |
921 |
931 |
983 |
959 |
958 |
939 |
988 |
994 |
980 |
925 |
| Gene Density (per Kb) |
0.591 |
0.608 |
0.597 |
0.565 |
0.59 |
0.623 |
0.574 |
0.577 |
0.591 |
0.601 |
0.593 |
0.592 |
0.588 |
| Average Gene length |
855 |
863 |
880 |
851 |
821 |
841 |
855 |
882 |
884 |
865 |
923 |
850 |
865 |
| Coding percentage |
50.5 |
52.5 |
52.6 |
48.7 |
47.9 |
52.5 |
49.8 |
50.9 |
52.2 |
52 |
54.8 |
50.4 |
50.9 |
| GC percentage content |
39.51 |
39.46 |
39.91 |
39.71 |
39.88 |
39.52 |
39.77 |
39.69 |
39.85 |
39.9 |
39.52 |
39.65 |
39.51 |
| Adenine content (%) |
31.3 |
31.53 |
31.31 |
31.34 |
31.27 |
31.53 |
30.3 |
31.55 |
31.28 |
31.34 |
31.86 |
31.47 |
31.57 |
| |
Cytosine content (%) |
18.5 |
18.42 |
18.68 |
18.61 |
18.85 |
18.48 |
19.61 |
18.62 |
18.48 |
18.77 |
18.26 |
18.62 |
18.39 |
| |
Guanine content (%) |
21 |
21.02 |
21.22 |
21.09 |
21.03 |
21.03 |
19.26 |
21.08 |
21.38 |
21.11 |
12.25 |
21.02 |
21.11 |
| |
Thymine content (%) |
29.18 |
29.01 |
28.77 |
28.94 |
28.84 |
28.94 |
30.82 |
28.75 |
28.86 |
28.76 |
28.61 |
28.87 |
28.91 |
| Forward |
No.of Bases present in CDS |
843291 |
821607 |
827070 |
893274 |
883416 |
805396 |
897264 |
872028 |
834081 |
857232 |
818520 |
891756 |
828855 |
| Gene (ORF’s) |
939 |
906 |
946 |
974 |
935 |
878 |
1007 |
971 |
966 |
943 |
964 |
997 |
927 |
| Gene Density (per Kb) |
0.594 |
0.563 |
0.592 |
0.5 |
0.592 |
0.557 |
0.603 |
0.585 |
0.608 |
0.573 |
0.575 |
0.603 |
0.59 |
| Average Gene length |
898 |
906 |
874 |
913 |
944 |
917 |
891 |
898 |
863 |
909 |
849 |
894 |
894 |
| Coding percentage |
53.4 |
51 |
51.8 |
54.8 |
56 |
51.1 |
53.7 |
52.5 |
52.5 |
52.1 |
48.8 |
53.9 |
52.7 |
| GC percentage content |
39.66 |
39.46 |
39.8 |
39.68 |
39.92 |
39.67 |
39.54 |
39.67 |
39.46 |
40.03 |
39.6 |
39.65 |
39.58 |
| Adenine content (%) |
31.85 |
31.85 |
31.48 |
31.81 |
31.44 |
31.58 |
31.9 |
31.65 |
31.8 |
31.49 |
31.53 |
31.75 |
31.58 |
| |
Cytosine content (%) |
19.27 |
18.27 |
18.57 |
18.33 |
18.39 |
18.35 |
18.29 |
18.36 |
18.39 |
18.57 |
18.63 |
18.38 |
18.37 |
| |
Guanine content (%) |
19.58 |
21.18 |
21.23 |
21.33 |
21.52 |
21.31 |
21.24 |
21.3 |
21.07 |
21.45 |
20.96 |
21.25 |
21.19 |
| |
Thymine content (%) |
30.27 |
28.26 |
28.71 |
28.51 |
28.62 |
28.74 |
28.55 |
28.66 |
28.72 |
28.48 |
28.86 |
28.59 |
28.83 |
| Over all |
Total Bases |
1578824 |
1509005 |
1595355 |
1529557 |
1576758 |
1575399 |
1557867 |
1558051 |
1588278 |
1543831 |
1573997 |
1552982 |
1570564 |
| Gene (ORF’s) |
1873 |
1885 |
1900 |
1899 |
1866 |
1966 |
1905 |
1929 |
1905 |
1931 |
1958 |
1977 |
1852 |
| Gene Density (per Kb) |
1,186 |
1,171 |
1,19 |
1,165 |
1,183 |
1,181 |
1,178 |
1,163 |
1,199 |
1,174 |
1,169 |
1,196 |
1,179 |
| Average Gene length |
876 |
884 |
877 |
888 |
878 |
877 |
879 |
890 |
873 |
886 |
887 |
872 |
879 |
| Coding percentage |
104.7 |
103.6 |
104.4 |
103.5 |
104 |
103.6 |
103.6 |
103.5 |
104.8 |
104.1 |
103.7 |
104.3 |
103.7 |
| GC percentage content |
38.86 |
38.73 |
39.08 |
38.49 |
39.16 |
38.88 |
38.87 |
38.9 |
38.97 |
39.19 |
39.56 |
38.89 |
38.83 |
| Adenine content (%) |
31.3 |
31.53 |
31.31 |
31.34 |
31.27 |
31.53 |
30.3 |
31.55 |
31.28 |
31.34 |
31.86 |
31.47 |
30.53 |
| |
Cytosine content (%) |
19.58 |
19.4 |
19.57 |
19.65 |
19.66 |
19.5 |
19.61 |
19.56 |
19.47 |
19.69 |
18.44 |
19.58 |
19.45 |
| |
Guanine content (%) |
19.27 |
19.32 |
19.5 |
19.29 |
19.29 |
19.37 |
19.26 |
19.33 |
19.51 |
19.49 |
21.11 |
19.3 |
19.37 |
| |
Thymine content (%) |
30.86 |
30.75 |
30.49 |
30.8 |
30.62 |
30.82 |
30.82 |
30.62 |
30.67 |
30.48 |
28.72 |
30.74 |
30.63 |
|