Mode Computed Frequencies Observed Freq. PEDs Mode Assignment
Unscaled Scaled Raman IR
ν1 3811(144,239)0.34 3640 - 3430# ν(O22-H23)(100) ν(O22-H23)
ν2 3526(134,72)0.67 3367 - - νasym(H17-N16-H18)(100) νasym(H17-N16-H18)
ν3 3456(136,226)0.06 3300 3207 3207 νsym(H17-N16-H18) (99) νsym(H17-N16-H18)
ν4 3190(10,360)0.21 3047 - - ν(C6-H10)(92) + ν(C5-H9)(6) ν(CH)
ν5 3174(14,330)0.15 3031 3061# 3041, 3068# ν(C3-H8)(53)+ ν(C2-H7)(45) ν(CH)
ν6 3161(11,200)0.52 3019 3042# 3025, 3042# ν(C5-H9)(89) - ν(C6-H10)(6) ν(CH)
ν7 3159(21,89)0.75 3017 3027# 3024#  ν(C2-H7)(53)- ν(C3-H8)(42) ν(CH)
ν8 3127(44,66)0.30 2986 3014# 3014# ν(C12-H15)(86) - ν(N16-H24)(10) ν(C12-H15)
ν9 3106(414,146)0.06 2966 2950# 2960, 2962# ν(N16-H24)(88) + ν(C12-H15)(10) ν(N16-H24)
ν10 3093(6,162)0.64 2954 2923# 2931, 2928# νasym(CH2)(95) νasym(CH2)
ν11 3047(23,299)0.04 2910 2863# 2894, 2864# νsym(CH2)(99) νsym(CH2)
ν12 1669(317,21)0.75 1594 - 1630# δas(NH3)(40)+ νas(CO2)(33)- δ'as(NH3)(16)- ρ2(NH3)(5) δas(NH3)
ν13 1659(433,7)0.75 1584 1587, 1590# 1582, 1589# νas(CO2)(53)+δ'as(NH3)(34)+ ρ(CO2)(5) νas(CO2)
ν14 1647(78,133)0.56 1573 1567 1579 ν(C2-C3)(20)+ν(C5-C6)(17)-ν(C1-C6)(13)-ν(C3-C4)(11)+ α2(R)(10)-β(C3-H8)(7)- β(C6-H10)(5) ν(R)
ν15 1627(38,29)0.63 1554 1551, 1531# 1572, 1532# ν(C1-C2)(20)+ ν(C4-C5)(20)-ν(C1-C6)(15)-α3(R)(8) -ν(C3-C4)(7)- β(C5-H9)(6) ν(R)
ν16 1622(84,16)0.65 1549 1481, 1463# 1453, 1454# δas(NH3)(34)+ δ'as(NH3)(32)+ δs(NH3)(11)+ ν(C19-O20)(8) δ'as(NH3)
ν17 1538(164,4)0.74 1469 -- 1435, 1438# β(C2-H7)(17)+ β(C3-H8)(14)- β(C5-H9)(12)+ ν(C3-C4)(11)- ν(C1-C2)(11)- β(C6-H10)(9)- ν(C1-C6)(8)+ ν(C1-O22)(7)+ ν(C4-C5)(5) β(CH)
ν18 1486(13,11)0.75 1419 1419, 1414# 1417, 1416# δ(CH2)(89) δ(CH2)
ν19 1464(28,2)0.75 1398 -- 1363, 1367# ν(C5-C6)(19)- β(C6-H10)(13)-ν(C2-C3)(13)- α(C-OH) (8)- β(C2-H7)(7)+ β(C3-H8)(6)+β(C4-C11)(5) + β(C1-O22)(5)+ν(C4-C5)(5) ν(R)
ν20 1423(566,20)0.74 1359 1365, 1368# 1332, 1328# δs(NH3)(71)- ν(C19-O20)(9)- δas(NH3)(6) δs(NH3)
ν21 1393(35,26)0.62 1330 1327, 1328# - α(C11-C12-H15)(30)- α(H15-C12-N16) (17)- ω(CH2)(12)+ ρ(CH2)(9)+ ν(C19-O21)(7) α(C11-C12-H15)
ν22 1364(103,4)0.37 1303 - 1286# β(C5-H9)(19)+ β(C3-H8)(12)+ ω(CH2)(11)+ α(C-OH)(10)- α(H15-C12-C19)(8)+ β(C6-H10)(7) β(CH)
ν23 1360(20,7)0.20 1298 -- 1267 ω(CH2)(16)+ ν(C2-C3)(11)+ν(C4-C5)(7)+ ν(C1-C6)(6)-ν(C5-C6)(6)- α(C-OH)(6)- α(H15-C12-C19)(6)- ν(C1-C2)(6)- β(C3-H8)(5) - ν(C3-C4)(5)- β(C5-H9)(5) ν(R)
ν24 1344(289,18)0.19 1284 1284, 1286# 1247, 1246# νs(CO2)(41)- δ(CO2)(10)- α(C11-C12-H15)(9)+ δs(NH3)(8)- ν(C12-C19)(8)+ α(H15-C12-N16) (7) νs(CO2)
ν25 1332(6,13)0.61 1272 1249, 1247# 1243 ω(CH2)(19)+ ν(C3-C4)(11)-ν(C4-C5)(10)- β(C2-H7)(8)+ ρ(CH2)(5)+ ν(C5-C6)(5)-ν(C1-C6)(5) ω(CH2)
ν26 1275(5,33)0.34 1218 1214, 1212# 1214, 1213# α(H15-C12-N16) (21)+ ρ(CH2)(17)+ α(C11-C12-H15)(17+ ω(CH2)(14) α(H15-C12-N16)
ν27 1268(173,65)0.03 1211 1164, 1178# 1176, 1177# ν(C-OH)(46)+ α1(R)(10)- ν(C1-C2)(9)- ν(C5-C6)(7)- β(C3-H8)(7)- β(C2-H7)(5) ν(C-OH)
ν28 1237(43,3)0.72 1181 -- 1155, 1153# r(CH2)(18)- α(C11-C12-H15) (16)- α(H15-C12-N16) (8)- ρ1(NH3) (8)+ ρ2(NH3)(7)+ ν(C11-C12)(7)- α(C11-C12-N16)(5)+ ν(C4-C5)(5) ρ(CH2)
ν29 1220(3,82)0.05 1165 1156, 1150# - ν(C4-C11)(38)- α1(R)(11) -ν(C3-C4)(9)-ν(C5-C6)(7) - ν(C2-C3)(5)+ ω(CH2)(5)- β(C5-H9)(5) ν(R)
ν30 1194(2,7)0.28 1140 1114, 1113# - β(C2-H7)(29)- β(C3-H8)(20)+ β(C5-H9)(13)- β(C6-H10)(11)-ν(C2-C3)(8)- α(C-OH)(6)+ ν(C1-C2)(5) β(CH)
ν31 1187(275,30)0.07 1134 1100, 1098# 1113, 1112# α(C-OH)(46)+ ν(C1-C6)(16) -β(C6-H10)(13)- ν(C1-O22)(10) α(C-OH)
ν32 1141(34,3)0.66 1090 - 1099, 1099# β(C5-H9)(12)-β(C6-H10)(11)-ρ2(NH3) (10) - ν(C5-C6)(8)+ρ(CH2)(8)-ν(C11-C12)(7)+ ρ1(NH3)(7) +β(C3-H8)(7)+ ν(C2-C3)(6) - β(C2-H7)(5) β(CH)
ν33 1112(130,8)0.33 1062 1045, 1046# 1042, 1046# ρ2(NH3)(24)+ α(C11-C12-H15) (8)+ α(H15-C12-C19)(7)+ ν(C11-C12)(6)-ν(C5-C6)(6)- β(C6-H10)(6)+ α(N16-C12-C19)(5)- ν(C12-N16)(5) ρ2(NH3)
ν34 1084(17,6)0.74 1035 1017, 1017# 1016, 1017# ρ1(NH3)(30)+ ρ(CH2)(12)+ ρ2(NH3)(11)+ α(H15-C12-C19)(9)+ α(N16-C12-C19)(7) ρ1(NH3)
ν35 1038(38,30)0.50 991 986, 985# 986, 988# ν(C12-N16)(30)- ν(C11-C12)(21)- τ(CH2)(7)+ ρ2(NH3)(7)+ α(C4-C11-C12)(6) ν(C11-C12)
ν36 1027(2,0)0.12 981 - 939, 939# α1(R)(50)+ ν(C1-C2)(11)+ν(C1-C6)(10)- ν(C4-C5)(7)- ν(C3-C4)(7)- β(C6-H10)(5) α1(R)
ν37 979(0,1)0.34 958 935, 938# - γ(C5-H9)(37)-γ(C3-H8)(22) - γ(C6-H10)(20)+ γ(C2-H7)(11) +Φ3(R)(8) γ(CH)
ν38 956(2,2)0.72 936 894, 897# - γ(C3-H8)(31)+ γ(C5-H9)(19)+ Φ1(R)(17)- γ(C2-H7)(16)- γ(C6-H10)(10) γ(CH)
ν39 943(20,8)0.49 923 878 896, 899# τ(CH2)(29)- ρ1(NH3)(28)- ν(C11-C12)(12)+ α(C11-C12-N16)(5) τ(CH2)
ν40 896(146,25)0.10 877 855# 878, 878# ν(C12-C19)(32)+ δ(CO2)(10)+ ρ2(NH3)(10) - ν(C11-C12)(7)- α(C11-C12-C19)(6) ν(C12-C19)
ν41 860(24,20)0.01 842 845, 846# 842, 842# γ(C6-H10)(16)+ ν(C12-N16)(12)+ γ(C2-H7)(8)- Φ2(R)(6)+ ν(C5-C6)(6)- ν(C12-C19)(6)+ γ(C1-O22)(5)- γ(C4-C11)(5) ν(C12-N16)
ν42 849(12,45)0.09 831 828, 829# 829, 830# γ(C6-H10)(12)-α2(R)(11)- ν(C1-O22)(8) )-ν(C1-C2)(7)-ν(C1-C6)(6)- ν(C5-C6)(5) +γ(C5-H9)(6) ν(R)
ν43 830(12,8)0.54 812 808 803, 808# γ(C6-H10)(35)+γ(C5-H9)(19)- γ(C2-H7)(11) - ν(C12-N16)(9)-γ(C3-H8)(6) - τ(CH2)(5) γ(CH)
ν44 822(57,6)0.11 804 796, 797# 793, 799# γ(C2-H7)(36)+γ(C3-H8)(19)- ν(C12-N16)(10)+ γ(C1-O22)(8)- τ(CH2)(7) γ(CH)
ν45 806(74,22)0.02 789 741, 738# 741, 739# d(CO2)(25)-α1(R)(12)+ ω(CO2)(10)+ ν(C1-O22)(10)+ ν(C11-C12)(6)+ ν(C12-C19)(5) δ(CO2)
ν46 737(5,5)0.64 721 714, 714# 713, 715# Φ1(R)(53)+ ω(CO2)(11)- γ(C1-O22)(11)- γ(C4-C11)(11) Φ1(R)
ν47 721(2,6)0.10 706 - - Φ1(R)(29)- ν(C4-C11)(11)- d(CO2)(11) - α1(R)(9) - ω(CO2)(6)- γ(C1-O22)(5)+ ν(C1-O22)(5) ν(C4-C11)
ν48 676(13,7)0.44 662 641, 642# 646# Φ1(R)(20)+d(CO2)(17)- ω(CO2)(16)+ α(N16-C12-C19)(11)- ν(C12-C19)(6)+ α(C4-C11-C12)(6) ω(CO2)
ν49 654(1,12)0.71 640 574, 574# 651 α3(R)(78)+ β(C1-O22)(5) α3(R)
ν50 557(6,2)0.48 545 -- 576, 575# γ(C1-O22)(16) )- Φ2(R)(13) +ρ(CO2) (12) - α2(R) (10)- γ(C4-C11)(8)+ α(N16-C12-C19)(8) + α(C11-C12-N16)(6) - α(C4-C11-C12) (6) γ(C4-C11)
ν51 522(60,3)0.16 511 528, 534# 530, 535# γ(C1-O22)(25)-Φ2(R)(23)-γ(C4-C11)(12)-ρ(CO2) (11) γ(C1-O22)
ν52 490(37,3)0.57 480 492, 496# 495, 499# α2(R)(37)+ γ(C1-O22)(7)+ ν(C12-C19)(7)+ ρ(CO2) (7)-Φ2(R) (7) α2(R)
ν53 426(8,1)0.20 417 455, 457# 434, 435# Φ3(R)(38)+β(C1-O22)(29)- α3(R)(10)- β(C4-C11)(8) β(C1-O22)
ν54 424(6,0)0.61 415 -- 408# Φ3(R)(63)- β(C1-O22)(12) Φ3(R)
ν55 402(15,8)0.37 393 380, 386# 388# α(C11-C12-N16)(33)+ α(C11-C12-C19)(11)- Φ1(R) (8)+ α2(R)(5) α(C11-C12-N16)
ν56 341(22,4)0.27 334 338# 340# α(C11-C12-N16)(23)-r(CO2)(10)+Φ1(R)(8)+ α(N16-C12-C19)(7)- β(C4-C11)(6)- β(C1-O22)(5)+ γ(C1-O22)(5) ρ(CO2)
ν57 329(82,6)0.58 322 336, 331# 327# α(N16-C12-C19)(32)- ρ(CO2)(16)+ τ(NH3)(6)- ρ2(NH3)(6)+ τ(OH)(6)- γ(C4-C11)(5) α(N16-C12-C19)
ν58 321(159,0)0.74 314 311, 313# 313# τ(OH)(87) τ(OH)
ν59 302(4,1)0.75 296 -- -- β(C4-C11)(38)+ β(C1-O22)(12)+ α(C11-C12-N16)(7) + τ(R’’)(5)+ γ(C4-C11)(5) β(C4-C11)
ν60 255(26,4)0.41 250 256, 257# 294# τ(NH3)(62) + δ'as(NH3)(12)- α(N16-C12-C19)(5) τ(NH3)
ν61 183(4,2)0.30 179 196# -- α(C11-C12-C19)(24)-Φ2(R)(12)+α(C4-C11-C12)(9) + ν(C12-C19)(8)+ν(C4-C11) (7)-w(CO2)(6)- α1(R)(5) α(C11-C12-C19)
ν62 164(36,1)0.74 160 167# -- Φ2(R)(41)+α(C11-C12-C19)(22)-α(C4-C11-C12)(10) Φ2(R)
ν63 77(1,3)0.75 75 -- -- τ(CO2)(40) - τ(NH3)(31)+ τ(R’) (10) τ(CO2)
ν64 62(19,2)0.71 61 -- -- τ(CO2)(31) - τ(NH3)(25)-α(C11-C12-C19)(11)+ α(C4-C11-C12)(7)-γ(C4-C11)(6)+Φ2(R)(5) α(C4-C11-C12)
ν65 47(25,4)0.75 46 -- -- τ(R’’) (58) + τ(CO2)(13) - τ(NH3)(10)+ τ(R’) (6) τ(R’’)
ν66 40(8,7)0.75 39 -- -- τ(R’) (38)+ τ(CO2)(15) - τ(NH3)(14) + γ(C4-C11)(10)- τ(R’’)(8) τ(R’)
The number before the modes are the % potential energy calculated using normal coordinate analysis. The modes contributing with ≤ 5% have been omitted. The abbreviations ν, δ, α(R), Φ1(R), ν(R), β, γ, α(A-B-C), ω, ρ, τ asym and sym have been used for stretching, scissoring, ring planar deformation, ring non-planar deformation, ring stretching, in plane bending, out of plane bending, angle bending, wagging, rocking, torsion, anti-symmetric and symmetric respectively.
Calculated wave numbers up to 1000 cm-1 were scaled by the scale factor 0.9786 and those above 1000 cm-1 by the scale factor 0.9550 for larger wave numbers. Number outside bracket is frequency in cm-1 unit, numbers within the bracket are IR intensity (approximate) and Raman activity (approximate) and number outside bracket is depolarization ratio. The values superscripted with # are taken from literature Ref.-[6]
Table 7: Observed and computed IR and Raman frequencies of the normal modes of vibration, PEDs and assignments for the most stable conformer of L-TYR in zwitterionic form.