|
Amino Acid Substitution |
KRAS DNA Mutation |
Detectability
(%) |
5% Mutant KRAS DNA on Plasmid |
p.A11P |
GCT >CCT |
100 |
p.G12Fa |
GGT >TTT |
0b |
p.G12I |
GGT >ATT |
100 |
p.G12L |
GGT >CTT |
0 |
p.G12N |
GGT >AAT |
100 |
p.G12Y |
GGT >TAT |
100 |
p.G13I |
GGC >ATC |
100 |
p.G13N |
GGC >AAC |
100 |
p.V14I |
GTA >ATA |
100 |
p.G15D |
GGC >GAC |
100 |
p.G15S |
GGC >AGC |
0c |
p.A59E |
GCA > GAA |
100 |
p.A59G |
GCA > GGA |
100 |
p.A59S |
GCA >TCA |
100 |
p.A59Ta |
GCA >ACA |
100 |
p.G60A |
GGT > GCT |
100 |
p.E62D |
GAG > GAT |
100 |
p.E63K |
GAG >AAG |
100 |
p.G13D |
GGC > GAC |
100 |
p.V14I |
GTA >ATA |
100 |
DNA Insertions and Deletions |
KRAS DNA Mutation |
Detectability
(%) |
c.30_31insGGA |
GGAGCT > GGAGGAGCT |
0 |
c.35delG |
GGT>G^T |
100 |
c.36_37insGGT |
GGTGGC > GGTGGTGGC |
100 |
c.187_189delGAG |
GGAGT > G^^^T |
100 |
NSCLC FFPETd |
Amino Acid Substitution |
KRAS DNA Mutation |
Detectability
(%) |
p.G12Fa |
GGT >TTT |
100 |
p.A59Ta |
GCA >ACA |
100 |
aThese plasmids were tested in both the plasmid mixture and in NSCLC FFPET specimens.bThe p.G12F plasmid blended at 5% with 95% wild-type genomic DNA was not detectable. However, the same plasmid blended at 10% or 15% was detected at 100%.cThe p.G15S plasmid blended at 5% with 95% wild-type genomic DNA was not detectable. However, the same plasmid blended at 10% or 15% was detected at 100%.dFive different NSCLC FFPET specimens with the G12F mutation were tested and all 5 showed 100% detectability. One NSCLC FFPET specimen with the A59T mutation was tested and detected 100%. |
|