Expression strain Induction method Advantages Disadvantages
BL21 Infection/induction with Lambda bacteriophage CE6 Tightest control of Un-induced expression The process of induction is tedious and the induction is not as efficient as DE3 derivatives
BL21(DE3) sopropyl-1-thio-β-Dgalactopyranoside (IPTG) induction of T7 polymerase from lacUV5 promoter High level of protein expression Leaky expression of T7 polymerase can lead to uninduced expression of potentially toxic proteins
BL21(DE3)pLysS IPTG induction of T7 polymerase Ease of induction Slight inhibition of induced expression when compared with BL21(DE3)
Lemo21(DE3) IPTG induction of T7 polymerase Optimizes overexpression of any given protein using only a single strain. Outperforms other systems in its ability to maximize the production of both routine and difficult-to-overexpress proteins. The exact insight in the mechanism by which optimized expression yields are achieved in Lemo21(DE3) is lacking. It is not sure, whether the over expressed proteins are suitable for functional and structural studies.
BL21-AI Induction of T7 polymerase with IPTG and arabinose Promotes tight regulation and high yields, especially used for high level expression of toxic protein Testing against a wider variety of proteins is necessary to demonstrate broad utility
C41(DE3) and C43 (DE3) IPTG induction of T7 polymerase The mutant strains C41(DE3) and C43(DE3) can minimize the phenomenon of plasmid instability for toxic proteins Testing against a wider variety of proteins is required to demonstrate the broad utility
Tuner(DE3), and Tuner(DE3)pLysS IPTG inducible T7 polymerase The lac permease (lacY) mutation allows uniform entry of IPTG into all cells in the population. Expression can be regulated from very low expression levels up to the robust. Tuner(DE3)pLysS helps in tighter control of over expression Different studies are to be carried out to understand the wider usage of the strain
Rosetta2 and Rosetta pLysS IPTG inducible T7 polymerase These strains are designed to enhance the expression of eukaryotic proteins that contain codons rarely used in E. coli. The codon specificity might cause different problems when the proteins are expressed in high levels.
BL21 CodonPlus RIL and CodonPlus(DE3)–RIL/RIPL IPTG inducible T7 polymerase    
Table 1: Different expression host for producing recombinant proteins and their main features.