Strain Name |
Locus |
Definition |
Primer used |
Sequence bp |
T. viride 01PP |
JX119211 |
Hypocrea rufa isolate 01PP-8315/11 18S ribosomal RNA gene, partial sequence; Internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28 S ribosomal RNA gene, partial sequence. |
ITS-1tccgtaggtgaacctgcgg
ITS-2 tcctccgcttattgatatgc |
1173bp |
T. harzianum Th azad |
KC800922 |
Trichoderma harzianum isolate Th-azad/CSAU 6796 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 4, partial sequence. |
ITS-1agagtttgatcctggctcag
ITS-4ggttaccttgttacgactt |
546bp |
T. asperellum Tasp/CSAU |
KC800921 |
Trichoderma asperellum isolate Tasp(CSAU)-8940 18s ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8s ribosomal RNA gene, and internal transcribed spacer 4, partial sequence |
ITS-1tccgtaggtgaacctgcgg
ITS-4 tcctccgcttattgatatgc |
641 bp |
T. koningii Tk (CSAU) |
KC800924 |
Trichoderma koningii isolate Tk (CSAU) 5201 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 4, partial sequence. |
ITS-1 tctgtaggtgaacctgcgg
ITS-4 ggaagtaaaagtcgtaacaagg |
206 bp |
T. atroviride 71L |
KC 008065 |
Trichoderma atroviridestrain TAU8 18S ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA, and internal transcribed spacer 2 complete sequence; and 28S ribosomal RNA partial sequence. |
ITS-1tcctccgcttattgatatgc
ITS-2 ggaagtaaaagtcgtaacaagg |
627bp |
T. longibrachiatum 21PP |
JX978542 |
Trichoderma longibrachiatum strain 21PP 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
ITS-1tcctccgcttattgatatgc
ITS-2 ggaagtaaaagtcgtaacaagg |
664 bp |
T. virens Tvi (CSAU) |
KC800923 |
Trichoderma virens isolate Tvi (CSAU)-417718S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 4, partial sequence. |
ITS-1 tcctccgcttattgatatgc
ITS-4 ggaagtaaaagtcgtaacaagg |
635 bp |