| OligonucleotidePrimerSequence(5’-3’) |
Source/Reference |
| LAMP |
|
|
| Hcp1-F3 |
CCCCATACCTTTACAAGGCC |
ThisStudy |
| Hcp1-B3 |
CGTGGATCCTCCAGGTGATT |
ThisStudy |
| Hcp1-FIP |
GCTGAGTTTCACTCTTGAATACCAGCATTATGAACTTCGAACGT |
ThisStudy |
| Hcp1-BIP |
ACCGGGGTTAACTGTGGTGTACTGCAGGCTAACGCTTTCAAC |
This Study |
| Hcp1-Loop |
TGCAAACTTTCCTCGAATGACA |
This Study |
| Hcp1-LoopProbe |
/56-FAM/ACGCTGAGGACCCGGA
TGCGAATGCGGATGCGGATGCCGATGCAAACTTTCCTCGAATGACA |
This Study |
| UGH-F3 |
TGCCAGCAGACATTGACG |
This Study |
| UGH-B3 |
CCGACCACTACGAACGGT |
This Study |
| UGH-FIP |
CGATTGCGATCTGCGGCCTGCGCCAGTTTCTGGTAACCG |
This Study |
| UGH-BIP |
TCTGCAGCCAGCAGCAGATCGCCTGCGAGTATTTCTTCCG |
This Study |
| UGH-Loop |
GCGCATAAGCACTTTCCGG |
This Study |
| UGH-LoopProbe |
/56-FAM/ACGCTGAGGACCCGGATGCGAATGCG
GATGCGGATGCCGATTTTGCGCATAAGCACTTTCCGG |
This Study |
| Quencherprobe |
TCGGCATCCGCATCCGCATTCGCATCCGGGTCCTCAGCGT/3BHQ_1/ |
Kubota et al., [11] |
| PCR |
|
|
| gyrA-A |
CGCGTACTATACGCCATGAACGTA |
Brisse and Verhoef, [42] |
| gyrA-C |
ACCGTTGATCACTTCGGTCAGG |
BrisseandVerhoef,[42] |
| DGGE |
|
|
| 341F |
CCTACGGGAGGCAGCAG |
Muyzeretal.,[25] |
| 341F(-GC) |
(CGCCCGCCGCGCCCCGCGCCCGTCCCGCCGCCCCCGCCCG-)CCTACGGGAGGCAGCAG |
Muyzeretal.,[25];Meyerand
Kuever,2008 |
| 907RA |
CCGTCAATTCATTTGAGTTT |
Muyzeretal.,[26];Ishiiand
Fukui,[27] |
