Accession Isolate Phylogenetic group/ virus Location Host

%nt identity

Pairwise aa similarity of various genes of CK-GL2

BLASTn Pairwise PP P1 HC Pro P3 6K1 CI 6K2 VPg NIa Pro NIb CP
D83749 MBGP IV Japan - 96 94 94 98 98 96 96 97 100 98 96 78 93
NC_003492 MB4 IV Japan - 96 94 94 98 98 96 96 97 100 98 93 78 93
AB439730 G1 IV Japan G.hybrida 94 92 93 95 97 91 94 97 98 96 96 78 93
AY192568 GDD IV USA Gladiolus sp. 94 92 93 93 97 92 90 98 96 97 96 79 91
AM884180 Lisianthus IV Taiwan E. russellianum 93 90 92 94 96 91 94 97 98 97 96 78 87
AB079888 GB2 IV Japan - 93 90 92 93 96 95 96 98 94 98 96 76 89
JN692500 Vfaba2 IV India V. faba 93 90 90 94 96 91 94 97 98 97 96 82 76
AB439729 Gla IV Japan G. hybrida 92 88 90 69 90 96 96 97 100 100 96 77 93
AB079886 M11 III Japan G. hybrida 90 85 89 70 95 92 94 97 100 97 93 79 87
AB079887 IbG III Japan G. hybrida 90 85 89 69 95 92 94 96 100 97 96 79 86
JX156423 SW3.2 II Australia Diuris sp. 85 80 88 72 95 88 94 97 96 88 91 75 91
HG970850 MD7 II Australia Lupinuscosentinii 85 80 88 72 94 88 92 97 96 87 96 75 90
HG970863 AR87C II Australia L. angustifolius 85 79 88 73 95 87 92 97 96 88 93 75 91
HG970855 LMBNN II Australia L. angustifolius 85 80 88 71 95 87 94 97 96 88 93 75 91
HG970858 ES55C II Australia L. angustifolius 85 80 88 72 95 88 94 97 96 88 93 75 91
HG970860 PN83A I Australia L. angustifolius 85 80 88 71 94 89 96 97 88 90 93 76 92
HG970861 PN80A I Australia L. angustifolius 85 79 88 71 94 89 96 96 86 90 92 76 92
HG970852 GB17A I Australia L. angustifolius 85 79 88 72 94 87 90 97 88 91 91 76 91
FJ492961 Fr I S. Korea Freesia sp. 85 79 88 71 94 87 96 96 88 90 92 75 91
HG970847 MD1 I Australia L. cosentinii 85 78 88 72 94 88 92 97 96 89 92 76 91
JX173278 KP2 I Australia D. magnifica 85 79 88 70 94 88 88 96 96 90 93 76 91
HG970851 SP1 I Australia L. angustifolius 85 79 88 69 94 88 94 97 94 91 92 76 91
HG970865 AR93C I Australia L. angustifolius 85 79 88 71 94 87 94 96 96 90 92 76 91
HG970869 NG1 I Australia L. angustifolius 85 79 88 71 94 87 94 96 92 91 92 76 91
AB439732 92-1 V Japan Trifoliumpratense 83 76 87 72 91 88 94 95 92 87 96 74 89
U47033 S V Australia V. faba 83 78 86 68 89 90 96 95 94 86 93 75 88
HG970866 LP VI Australia L. pilosus 81 73 86 72 91 87 92 92 92 88 92 75 88
HG970868 LPexFB VI Australia V. faba 81 73 86 72 91 87 92 92 92 87 94 75 87
AB439731 90-2 VII Japan V. faba 80 72 85 69 94 82 88 92 90 88 92 74 87
HG970867 FB VII Australia V. faba 80 72 85 69 95 83 88 92 92 89 91 74 87
DQ641248 WLMV VIII USA L. albus 77 68 82 64 91 75 90 90 94 80 91 74 86
AB373203 CS IX Japan Pisumsativum 75 63 80 58 86 75 94 91 88 83 86 70 84
NC_003536 CYVV CYVV Japan Phaseolus vulgaris - 45 64 44 78 46 73 76 60 66 69 59 71
HG970870 CYVV CYVV Australia T. repens - 44 65 44 78 46 73 76 58 66 69 59 71
NC_019409 KP OrMV Australia - - 24 39 13 41 21 34 52 35 48 44 46 63
NC_018455 CYNMV Macluravirus USA D. opposita - 7 11 - - - - - - - - - -
NC_010521 SVYV Ipomovirus USA Watermelon - 06 13 - - - - - - - - - -
Abbreviations: aa=amino acid, nt=nucleotide, PP=Polyprotein.
BYMV= Bean yellow mosaic virus, CYVV= Clover yellow mosaic virus, WLMV=White lupin mosaic virus, OrMV=Ornithogalum mosaic virus, SVYV=Squash vein yellowing
virus and CYNMV=Chinese yam necrotic mosaic virus.
Table 3: Pairwise sequence similarity (%) of complete cds and various proteins of CK-GL2 with other potyvirus and closely related virus isolates reported worldwide.