SNPs

CHR

Position†

Regions

Known genes

rs12621278

2

173,019,799

2q31.1

ITGA6

rs17021918

4

95,781,900

4q22.3

PDLIM5

rs10486567

7

27,943,088

7p15

JAZF1

rs2928679

8

23,494,920

8p21.2

NKX3.1

rs1512268

8

23,582,408

8p21.2

NKX3.1

rs16901979

8

128,194,098

8q24

 

rs620861

8

128,404,855

8q24

 

rs1447295

8

128,554,220

8q24

 

rs10993994

10

51,219,502

10q11

MSMB

rs1859962

17

66,620,348

17q24.3

 

rs9623117

22

38,782,065

22q13

TNRC6B


†Position is based on NCBI build 36
Table 1: GWAS-identified PCa risk-associated SNPs that reside within the ChIPon- chip defined AR binding sites.