Figure 2: Illustration of assignment domains for nearest gene assignment criterion. (A) Notations used for the calculation of assignment domain; (B) Assignment domain (DX) calculation for TSS reference for gene X, DX = 0.5(TU-TX) + W as (TU-TX) < 2W and TX-TD >2W; (C) Calculation of DX for Body reference, DX is LX+DNX/2+UPX/2 as DNX < 2W and UPX < 2W.