| PATTERN |
OCC1
(#PRO / #TOT) |
OCC2
(#PRO / #TOT) |
FSCORE |
p-value |
| TNCNCNGA |
75(20/20) |
35(18/20) |
3894.25 |
1.76E-04 |
| TNNTCNGA |
87(20/20) |
45(17/20) |
3414.27 |
5.71E-04 |
| CCCNNTA |
70(20/20) |
34(18/20) |
3100.98 |
1.23E-03 |
| ATANNNGG |
58(20/20) |
27(16/20) |
3047.55 |
1.40E-03 |
| GNNTGTNT |
203(20/20) |
66(19/20) |
2728.31 |
3.07E-03 |
| GCCNTNT |
82(20/20) |
45(19/20) |
2719.77 |
3.13E-03 |
| TNCNNTGT |
100(20/20) |
58(19/20) |
2659.46 |
3.63E-03 |
| GNNTGNNT |
434(20/20) |
277(20/20) |
2480.68 |
5.63E-03 |
| ATNNNGCA |
76(20/20) |
41(15/20) |
2397.1 |
6.92E-03 |
| AANGCC |
78(20/20) |
44(20/20) |
2368.59 |
7.42E-03 |
| TANNNCCC |
62(20/20) |
32(17/20) |
2329.17 |
8.17E-03 |
| ANNNATCT |
113(20/20) |
62(18/20) |
2266.08 |
9.54E-03 |
| ATNNGGC |
61(20/20) |
33(15/20) |
2256.65 |
9.77E-03 |
| TNNGNNTG |
409(20/20) |
267(20/20) |
2226.36 |
1.05E-02 |
| TGCTGNNG |
39(20/20) |
18(12/20) |
2125.04 |
1.35E-02 |
| ANGNTTNA |
100(20/20) |
52(15/20) |
2120.31 |
1.37E-02 |
| ACANNNNC |
432(20/20) |
284(20/20) |
2106.46 |
1.41E-02 |
| CNNACNCA |
173(20/20) |
60(20/20) |
2082.1 |
1.50E-02 |
| GGTNGNNA |
73(20/20) |
41(17/20) |
2075.39 |
1.53E-02 |
| GATNGG |
61(20/20) |
30(11/20) |
2065.88 |
1.56E-02 |
| Note:
1. OCC: total number of patterns within the sequences of the corresponding cluster (OCC1 represents the downregulated DEG promoter sequence set; OCC2 represents the upregulated DEG promoter sequence set)
2. PRO: total number of sequences with the pattern in the corresponding cluster
3. TOT: total number of sequences in the corresponding cluster
4. FSCORE: results of the ANOVA between the two input clusters and the background sequence set) |
|
