| PATTERN |
OCC1
(#PRO / #TOT) |
OCC2
(#PRO / #TOT) |
FSCORE |
p-value |
| CNTNTGNA |
53(19/20) |
102(20/20) |
3267.99 |
1.67E-03 |
| TTCTNCT |
45(18/20) |
78(20/20) |
3257.9 |
1.70E-03 |
| CTTNNGNT |
57(20/20) |
96(20/20) |
3102.72 |
2.41E-03 |
| CAGNAGNA |
37(17/20) |
68(20/20) |
2951.51 |
3.38E-03 |
| CNAANNGC |
59(20/20) |
90(20/20) |
2810.07 |
4.64E-03 |
| CTNNNCAA |
85(20/20) |
125(20/20) |
2784.7 |
4.91E-03 |
| TNAGCNA |
55(16/20) |
104(20/20) |
2772.61 |
5.04E-03 |
| CTTNTG |
84(19/20) |
131(20/20) |
2747.18 |
5.34E-03 |
| GNAACNNA |
56(20/20) |
94(20/20) |
2706.67 |
5.85E-03 |
| TANCCA |
59(18/20) |
97(20/20) |
2635.22 |
6.86E-03 |
| TNGNNNAG |
268(20/20) |
340(20/20) |
2623.85 |
7.04E-03 |
| CNGNCTA |
34(15/20) |
70(20/20) |
2605.81 |
7.33E-03 |
| TNCNNCT |
373(20/20) |
465(20/20) |
2564.07 |
8.04E-03 |
| TNNGCNA |
211(20/20) |
292(20/20) |
2525.51 |
8.77E-03 |
| AGANGNA |
102(20/20) |
150(20/20) |
2474.9 |
9.82E-03 |
| CATTTG |
21(12/20) |
43(20/20) |
2408.01 |
1.14E-02 |
| CACNTT |
88(20/20) |
127(20/20) |
2392.7 |
1.18E-02 |
| GNNCTTNC |
62(19/20) |
100(20/20) |
2370.31 |
1.24E-02 |
| TNCNTNTG |
80(20/20) |
126(20/20) |
2339.02 |
1.33E-02 |
| TAGNNNGA |
42(18/20) |
70(20/20) |
2333 |
1.35E-02 |
| Note:
1. OCC: total number of patterns within the sequences of the corresponding cluster (OCC1 represents the downregulated DEG promoter sequence set; OCC2 represents the upregulated DEG promoter sequence set)
2. PRO: total number of sequences with the pattern in the corresponding cluster
3. TOT: total number of sequences in the corresponding cluster
4. FSCORE: result of the ANOVA between the two input clusters and the background sequence set) |
|
