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Isolation, Purification and Identification of a Novel HX-Producing Strain and Optimization of its Fermentation Medium
ISSN: 2572-4134

Journal of Food & Industrial Microbiology
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Isolation, Purification and Identification of a Novel HX-Producing Strain and Optimization of its Fermentation Medium

Xue Z1,2* and Zahng S3
1Luzhou Vocational and Technical College, Luzhou, PR China
2Luzhou Biomedical Engineering Institute, Luzhou, PR China
3Luzhou Loajiao Group Co., Ltd, Sichuan Luzhou, PR China
*Corresponding Author: Xue Z, Luzhou Vocational and Technical College, Luzhou Biomedical Engineering Institute, PR China, Tel: 0512-68418888, Email: [email protected]

Received Date: Mar 07, 2018 / Accepted Date: Apr 10, 2018 / Published Date: Apr 18, 2018

Keywords: Isolation; Identification; Hexanoic acid-producing strain; Fermentation medium; Optimization


Hexanoic acid (HX) is the precursor of ethyl caproate (EA), the main flavor component in Chinese Luzhou-flavor liquor (CLFL) according to the National Standard GB/T 10781.1-2006. EA is produced during the late fermentation stage of CLFL production in a mud pit, a fermentation container, by spirit reaction with HX. EA yields are determined by HX quantity from excessive spirits in lees, or fermented grains. The improvement of HX yields in CLFL production is a crucial technical problem for CLFL industries. Numerous methods have been developed to increase HX output in traditional liquor production [1].

One of the simplest and most widely adopted methods for improving CLFL quality is prolonged fermentation time. The fermentation time for regular liquor production is 45 days from lees entry to lees exit. To improve HX yield, the fermentation time for a pit in good fermentation condition is extended to 60, 90, or even 180 days. The relative HX amount, EA content, and CLFL quality increase as fermentation time increases. Another widely adopted method for improving CLFL production is multiple fermentation rounds (double fermentation). In this method, lees are retained in the bottom of the fermentation pit and are mixed with new fermentation starter powders (e.g., daqu in Chinese) for another one or two fermentation periods. After two or three fermentation periods, the amounts of HX and other organic acids increase and the microbial biochemical reaction of spirits with HX or other organic acids is enhanced, thus increasing total acid and ester contents and improving liquor flavor. The traditional methods to improve CLFL quality, however, decrease production efficiency and increase production cost [2].

For several centuries, the attempts of CLFL makers to economically improve liquor quality have been unsuccessful. A breakthrough in CLFL production finally occurred in the 1960s when EA was identified as the main flavor component of CLFL. The isolation, purification, and identification of HX-producing bacteria and the optimization of fermentation conditions are now routine work for the CLFL industry and researchers [3].

In the past decades, several HX-producing microbes have been isolated and identified from CLFL pit mud. The HX production of these bacterial strains outside of fermentation pits, however, are limited at 700 mg/mL HX [4].

In this study, we aimed to isolate and identify highly effective HXproducing bacteria. We also aimed to optimize fermentation conditions for the application of HX-producing bacteria in practical production.

Materials and Methods


Pit mud: The pit mud used in the present study was collected from the four corners and center of the bottom of a 180-year-old pit in Luzhou Laojiao Group Luzhou Laojiao Group Co. Ltd, a famous CLFL producer in Southern Sichuan, PRC.

Reagent: Yeast extracts, KCl, glucose, sodium acetate, and absolute ethanol were purchased from Kelong Reagent Factory (China, Chengdu). The standard material l2-ethyl butyrate was purchased from Aladdin Reagent Co., Ltd (China, Shanghai).

Culture medium

Isolation and enrichment culture medium: The culture medium contained the following components:5g sodium acetate; 1g yeast extracts; 10 mL 4% potassium dihydrogen phosphate; 5 mL 2%magnesium sulfate; 20 mL 0.5% calcium sulfate; 10 mL 5% ammonium sulfate; and 1 mL 5 m g/L biotin. The culture medium was brought to 1000 mL with tap water and its pH was adjusted to 6.0–6.5. Then, 2% agar was added to solidify the medium before sterilization at 121°C for 30 min in an autoclave. Prior to inoculation, 20 mL absolute ethanol was added to the medium.

Fermentation medium: Four fermentation media were selected for screening HX-producing bacteria.


Isolation of HX-producing bacteria from pit mud: ⇒ Pit mud ⇒Preparation of seed solution ⇒Enrichment culture Plate separation ⇒ Slope inoculation ⇒ Primary screening ⇒Rescreening Gas ⇒chromatography (GC) analysis ⇒Strain preservation.

Preparation of seed solution: A total of 1 g pit mud was added to 9 mL liquid isolation medium in a stoppered test tube. The tube was then placed in a 90°C water bath for 10 min. After cooling, 150 μL absolute ethanol was added to the tube. The seed solution was then cultured at 34°C and 0.08 MPa in a vacuum incubator until gas was produced.

Enrichment culture: A total of 1 mL HX-producing seed solution was pipetted and added to 9 mL liquid isolation culture medium in a stoppered tube. The tube was then placed in a 90°C water bath for 10 min. After cooling to 70°C, 150 μL absolute ethanol was added to the enrichment culture. The culture was then incubated under the abovementioned conditions for 15 days.

Plate separation: The tube of enrichment culture that produced the highest amount of gas was selected. A total of 10 μL enriched culture medium was drawn from the selected tube, spread on solid culture medium, and incubated at 90°C in an incubator for 10 min. Subsequently, 2% (V/V) absolute ethanol was added to the incubated culture medium until the culture medium cooled down to 70°C. The inoculated medium was incubated under the above conditions until the colonies of HX-producing bacteria appeared [5-9].

Slant culture: Colonies that possessed a regular morphology were selected and transferred to the surfaces of slant media and cultured in the above-mentioned conditions until the colonies of HX-producing bacteria appeared.

Preliminary screening: Colonies with entire edges and slightly raised and smoothly rounded tops were selected. A loopful of bacteria was picked up, placed in a drop of water on a slide, and stained by Gram staining. The stained bacteria were observed under microscopy. Motile, Gram-positive, rod-shaped bacterial cells with ellipsoid spores were selected for future screening.

Rescreening: Individual colonies from six selected clones were picked and inoculated into 5 mL isolation culture medium under the above conditions for 6 days. The bacteria were then transferred to 50 mL of fermentation culture medium under the above conditions for 15 days. GC was used to investigate 15-day-old fermentation broths to select the most efficient strain of HX-producing bacteria based on HX yields.

Pretreatment of fermented broth: The pH of 1 mL fermented esterifying liquid was adjusted to pH 3 with 1 M hydrochloric acid solution. The amount of hydrochloric acid solution required to adjust the solution pH to 3 was recorded.

A total of 10 μL 2-ethyl butyrate, the internal standard solution, was added to 490 μL fermented esterifying liquid. The mixture was vortexed vigorously. Then, the mixture was acidified to pH 3 with 1 M hydrochloric acid solution at half the volume of the 1 mL esterifying liquid. The acidified mixture was vortexed vigorously and then centrifuged for 10 minutes at 12,000 r/min. The supernatant was drawn and filtered using a 0.22 μM filter and stored at 4°C for future use.

Conditions of GC analysis: Chromatographic column: LZP-930 Liquor special analysis column (purchased from the Chinese Academy of Sciences, Lanzhou Institute of Chemical Physics).

Chromatographic conditions:

Detector temperature: 200°C

Vaporizer temperature: 200°C

Injection mode: Split ratio: 50:1

Column length: 25.0 mm

Inner diameter: 0.32 mm

Coating thickness: 1 μm

Programmed temperature: 65°C⇒5 min ⇒3.5°C/min ⇒ 145°C

Duration of Analysis: 28 min.


Molecular identification: Molecular biological identification was conducted based on the study of Xue [4].

Characteristics of growth and HX-production: Thirty 15 mL anaerobic tubes were filled with 15 mL fermentation culture medium each and inoculated with the seed liquid of HX-producing bacteria at 10% proportion. The inoculated media were cultured in a vacuum incubator at 34°C and 0.08 MPa. Three anaerobic tubes were selected every 2 days for bacterial counts and HX analysis.

Strain preservation screening fermentation culture media for high yields of HX: Four fermentation culture media, as described by Xue [4] were screened for high HX output.

Optimization of fermentation culture media

Screening of carbon source, nitrogen source, and inorganic salt: A single-factor experiment was used to change only one nutrient for the fermentation culture medium, e.g., the sodium acetate medium mentioned in section 1.2.3 of the present paper. The amounts of carbon sources (glucose, starch, lactose, and sucrose), nitrogen sources (yeast extract, beef extract, peptone, ammonium chloride, ammonium sulfate, and urea), and inorganic salts (KCl, K2HPO4, KH2PO4, MgSO4, MnSO4, CaCO3) were the same as those in the screened fermentation medium.

Single-factor experiment: A single-factor experiment was performed to determine the dosage range of the main components of fermentation culture medium A e.g., glucose, yeast extracts (used instead of beef extract due to cost), KCl, sodium acetate, and alcohol. The experimental concentration gradient was composed of two to three concentration levels that increased or decreased the concentrations of the components of the sodium acetate culture medium.

Optimization of fermentation culture medium by Taguchi design method: Based on the single-factor experiment, four ingredients yeast extract, sodium acetate, ethanol and KCl of the fermentation culture medium at three levels (Table 1) were selected for further optimization. A scheme for the orthogonal test (Table 2), which includes three factors and three levels, was designed using the Taguchi design method in Minitab 17.

Level Factor
Yeast extract KCl Sodium acetate Ethanol
g/L mL/L
1 1.5 1.2 15 10
2 2.5 1.8 20 15
3 3.5 2.4 25 20

  Table 1: Factors and levels

Group Yeast extract KCl Sodium acetate Ethanol
g/L mL/L
1 1.5 1.2 15 10
2 1.5 1.8 20 15
3 1.5 2.4 25 20
4 2.5 1.2 20 20
5 2.5 1.8 25 10
6 2.5 2.4 15 15
7 3.5 1.2 25 15
8 3.5 1.8 15 20
9 3.5 2.4 20 10

Table 2: Orthogonal test for HX yields

The total cell number, which is represented by the optical density (OD) of 10 day fermentation broth, was detected by a spectrophotometer. The caproic acid content of the 15 day fermentation broth was detected using GC.

Validation experiments

Validation experiments were performed based on the optimal formula in section

Data processing: Data were processed using Excel 2007 (Microsoft Excel, USA), Minitab 17 (PA, USA),and SPSS19 (Chicago, USA).

Results and Discussion

GC analysis of fermented broth

The HX chromatograms of the standard material and fermentation broth.

The chromatographic peak in Figure 1 demonstrated that the GC conditions in the present study were suitable for HX detection.


Figure 1: GC chromatograms.

The HX yields of six clones in 15 day fermented broth are shown in Table 3. The HX yields of six clones were compared with one-way ANOVA in SPSS 17. The results indicated that the HX yields of clone 5 in 15-dayfermented broth was significantly higher than those of clones 1,2, 3,4, and 6 (Sigtow-tailed=0,0,0,0<0.01). Therefore, clone 5 was selected for investigation.

Clones 1 2 3 4 5 6
HX yields
189.56 198.99
± 11
234.76 263.1
± 26.29
206.33 260.3
± 47.52
365.89 383.64
± 16.4
585.78 609.22
± 20.46
167.34 174.43
± 7.11
196.35 286.69 295.89 386.78 623.45 181.55
211.07 267.84 278.67 398.24 618.44 174.39

Table 3: HX yields of sixs.

Morphological characterization of clone 5

The results for the morphological characterization of clone 5 are (Figure 2).


Figure 2: Morphological characterization of clone 5.

Clone 5 possesses the following characteristics:

1. Colony characteristics: round or roughly round; white or yellowish; opaque or translucent; relatively uniform edges; smooth surface; colony diameter 1.5-2 mm;

2. Bacterial cell morphology: long rods;

3. Spore morphology: ellipsoidal;

4. Spore-bearing position: mostly located in the center of the cell with a small number of cells at one end;

5. Gram staining: G+.

Molecular identification

The gel electrophoresis results of 16SrDNA amplified by PCR were listed in Figure 3, the sequencing results for16SrDNA fragments is listed in Figure 4 and the evolutionary tree constructed by Mega 7 was shown in Figure 4.


Figure 3: The 16srDNA of clone 5.


Figure 4: 16srDNA gene sequence.

The sequence of the 16srDNA primer amplification product in Figure 3 was 1427-bp long, BLAST results in NCBI(https://blast.ncbi.nlm.nih. gov/Blast.cgi?PROGRAM=blastn&PAGE_TYPE=BlastSearch&LINK_ LOC=blasthome) revealed that clone 5 had a 100% sequence similarity to uncultured bacterium claab17d12, uncultured bacterium clone aaa62b11≥ 99.5% to Clostridium sartagoneforme. A phylogenetic tree was constructed by selecting 100 strains of uncultured and cultural bacterial strains wit similarity ≥ 90% and the sequence of each strain to be tested. The strain of clone 5 was located in the same branch with the uncultured bacterium claab17d12 the similarity was 100% (Figure 4). According to the phylogenetic tree similarity combined with morphological characteristics, cultural characteristics, the strain was identified as Clostridium sartagoneforme, which is a cultural bacterium.

This is the first study to discover that C. sartagoneforme produces HX in CSFL pit mud.

Growth curve and HX-production

The results for HX-producing bacterial counts and HX contents are shown in Figure 5.


Figure 5: The growth and HX-production curves.

By analyzing the curves in Figure 5, the following conclusions were drawn:

1. Based on the bacterial growth curve, the initial lag period lasted for 4 days. The total number of bacterial cells (TNBC) negligibly increased during this period. The logarithmic growth phase occurred during the sixth to eighth days of fermentation. The TNBC increased the fastest during this period. The stationary phase occurred on the eighth to tenth days of fermentation. The TNBC negligibly increased during this period. Bacterial decay occurred from the 10th day to the end of fermentation. The highest TNBC was 53.72 ± 1.32 (× 107 cfu/ mL) and was observed on the 10th day.

2. Given that the fastest increase in HX production occurred during the eight to the 60th day of fermentation, the optimal fermentation period for HX production is 16 days.

Screening of HX-producing fermentation culture medium

The results of GC analysis for HX yield in the four candidate fermentation culture media are shown in Table 4.

Medium A B C D
HX yields
788.726 800.85 ± 12.87 189.110 196.87 ± 7.69 194.150 205.54 ± 12.32 374.65 391.99 ± 15.34
814.352 204.496 203.847 397.54
799.46 196.991 218.617 403.79

Table 4: X yields in four candidate fermentation culture media.

The results in Table 4 revealed that the highest HX yield was in fermentation culture medium A. Further analysis by one-way ANOVA indicated that HX yield in fermentation culture medium A was significantly higher than those in fermentation culture media B, C, and D. Moreover, HX yield in fermentation culture medium A was higher than those in fermentation culture media B,C, and D by 4.07,3.90, and 2.04 times, respectively.

Screening for carbon source, nitrogen source, and inorganic salt

HX yields in fermentation liquids with various carbon sources, nitrogen sources, and inorganic salts are shown in Figure 6. The following conclusions were drawn from the screening results for the optimal carbon source, nitrogen source, and inorganic salt for fermentation culture medium A:

1. Among the four carbon sources, the highest HX output 9 (Figure 6A) was achieved with 1 g/L glucose as the carbon source. ANOVA analysis revealed that HX output with glucose as the carbon source was significantly higher (P<0.01) than those with lactose, sucrose, or starch as carbon sources.

2. Among the six nitrogen sources, the highest HX output (Figure 6B) was achieved with 2.5 g/L beef extract as then nitrogen source. ANOVA analysis revealed that HX output in the fermentation liquid with beef extract as the nitrogen source was significantly higher than those with(P=0.048), ammonium sulfate, ammonium chloride, and urea (P<0.01) as nitrogen sources. HX yields with yeast or beef extracts as nitrogen sources were not significantly different (P=0.23). Therefore, yeast extract was used as the nitrogen source for further optimization because of economic reasons.

3. Among the inorganic salt sources, the highest HX output (Figure 6C) was achieved with 1.8 g/L KCL. ANOVA analysis revealed that the HX output with KCL was significantly higher than all the others (P<0.01).

Therefore, the optimal carbon source, nitrogen source, and inorganic salt for HX production were glucose, beef extract, and KCl.


Figure 6: Screening results for carbon source (A), nitrogen source (B), and inorganic salt (C).

Single-factor experiment

The HX contents in the 15-day fermentation liquid of the singlefactor experiment are shown in Figure 7.


Figure 7: Results of single-factor experiment.

The optimal concentration for each ingredient of the fermentation culture medium in HX production with strain K3 was 2.5 g/L yeast extract, 1.8 g/L KCl, 15 mL/L ethanol, 20 g/L sodium acetate, and 1.5 g/L glucose. The influence of each individual factor was calculated by subtracting the zero concentration from the highest HX production. Comparing the effects of individual factors revealed that sodium acetate was the most effective factor of HX production, whereas glucose was the most ineffective. Therefore, glucose was excluded from further optimization.

Total cell number of fermentation broth by Taguchi design method

A spectrophotometer was used to detect the total cell number, which was represented by OD, in 10-day fermentation broth that was optimized via the Taguchi design method. The results are shown in Figure 8.


Figure 8: OD(optical density) of 10-day fermentation broth

The OD in Figure 8 demonstrated that group 1 had the highest cell number among all experimental groups. Comparing the OD in all the experimental groups revealed that the OD values of groups 1,2 ,6 and 9 were not significantly different (P>0.05). The OD values of these groups, however, are significantly higher than those of other groups (P<0.05).

Optimization of HX production by Taguchi design method

The GC detection results of the 16 day fermentation liquid are (Table 5).

Minitab 17 (Minitab Inc.; State College, PA) software was used to analyze the experimental results in Table 5 to obtain the response means of HX content, response means of SN ratios, mean main effect diagram, and the SN ratio of the main effect diagram. The location, dispersion, and adjustment factors were analytically determined to obtain the optimal factor and level combination for the fermentation medium [5]. The results were showed in (Tables 6 and 7), (Figures 9 and 10).

Test number Factors HX content (mg/100mL) Y
Yeast extract
Sodium acetate
1 2 3
1 1.5 1.2 15 10 782 795 820 799
2 1.5 1.8 20 15 1050 1026 1050 1042
3 1.5 2.4 25 20 838 870 888 865.33
4 2.5 1.2 20 20 717 730 697 714.67
5 2.5 1.8 25 10 1169 1190 1269 1209.33
6 2.5 2.4 15 15 671 680 691 680.67
7 3.5 1.2 25 15 1283 1295 1383 1320.33
8 3.5 1.8 15 20 828 830 858 838.67
9 3.5 2.4 20 10 759 770 780 769.67

Table 5: The HX content of the Taguchi design.

Level Factors
Yeast extract KCl Sodium acetate Ethanol
1 902.1 944.7 772.8 926.0
2 868.2 1030.0 842.1 1014.3
3 976.2 771.9 1131.7 806.2
Delta 108.0 258.1 358.9 208.1
Rank 4 2 1 3

Table 6 : Response means for HX content.

Level Factors
Yeast extract KCl Sodium acetate Ethanol
1 59.05 59.18 57.73 59.14
2 58.46 60.16 58.39 59.81
3 59.54 57.71 60.94 58.10
Delta 1.07 2.45 3.21 1.71
Rank 4 2 1 3

Table 7: Response means for signal-to-noise ratios.

To identify the factors that significantly influence the mean value, the mean variance of the experimental results was analyzed further. The results are shown in Table 8 analysis of variance of mean value.

Source DF AdjSS AdjMS F-value P-value
Yeast extract 2 47115 23557 233.07 0
KCl 2 288283 144142 1426.10 0
Sodium acetate 2 592738 296369 2932.20 0
Ethanol 2 173352 86676 857.55 0
Error 18 1819 101    
Total 26 1103307      

Table 8: Analysis of variance of mean value.


Figure 9: Main effects diagram of each factor for HX content.


Figure 10: Main effects diagram of each factor for SN ratios.

Based on the analysis of response for the means of HX content response means for signal-to-noise ratios (SNR); main effect diagram for means of HX content (Figure 9); main effects diagram for SN ratios of each factor (Figure 10) results of variance analysis, and with caproic acid yields as the index, yeast extract, KCl, sodium acetate, and ethanol all significantly influence HX content. The relative importance of these factors was as follows: sodium acetate>KCl>ethanol>yeast extract. The optimal factor and level combination for HX output was level 3 yeast extract, level 2 KCl, level 3 sodium acetate, and level 2 ethanol. Specifically, the optimal formula for maximum HX output was 3.5 g/L yeast extract, 1.8 g/L KCl, 25 g/L sodium acetate, and 15 mL/L ethanol.

The predicted HX yield using this formula was 2112.346 mg/100 mL.

Validation experiment

The mean of HX yields in the validation experiment was 2018.29 ± 46.37 mg/100 mL and the SNR was8.78dB. The results demonstrated that the HX yields in the validation experiment were close to the predicted HX yield, thus indicating that this optimization scheme can achieve the desired effect and has good stability [10-12].


In the present study, an efficient HX-producing strain was isolated from 280 year old pit mud. This strain yielded 609.22 ± 20.46 mg/100 mL HX. Morphological identification indicated that the strain possessed the typical characteristics of HX-producing strains, such as G+ and spore formation [12-14]. Bioinformatics analysis revealed that the strain shared 99.1% sequence similarity with C. sartagoneforme. Meanwhile, the four candidate fermentation culture media A, B, C and D were tested on the basis of maximum caproic acid yield. Singlefactor experiments were performed based on the selected fermentation culture medium A. The results of the single-factor tests showed that the maximum HX yields in 15-day-old fermentation broth were obtained with culture medium A that contained 2.5 g/L yeast extract, 1.8 g/L KCl, 20 g/L sodium acetate, and 15 mL/L ethanol. A further orthogonal experiment was designed using Taguchi methods in Minitab 17. The results demonstrated that the optimum formula for maximum HX output was 3.5 g/L yeast extract,1.8 g/L KCl, 25 g/L sodium acetate, and 15 mL/L ethanol. The validation experiment had a maximum HX yield of 2018.29 ± 46.37 mg/100 mL.


This research was financially supported by the Science and Technology Support Plan Project of Sichuan Province (No.2014FZ0018), the Social Development Project of Luzhou Municipal Science and Technology Bureau(NO.2018-S-44(4/8)), and the Key Fund Project of Sichuan Provincial Department of Education(18ZA025).


Citation: Xue Z, Zahng S (2018) Isolation, Purification and Identification of a Novel HX-Producing Strain and Optimization of its Fermentation Medium. J Food Ind Microbiol 4: 126. DOI: 10.4172/2572-4134.1000126

Copyright: © 2018 Xue Z, et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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