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Microbial Ecology in the Era of Next Generation Sequencing | OMICS International | Abstract
ISSN 2469-9853

Journal of Next Generation Sequencing & Applications
Open Access

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Review Article

Microbial Ecology in the Era of Next Generation Sequencing

Surajit De Mandal1, Amrita Kumari Panda2, Satpal Singh Bisht2 and Nachimuthu Senthil Kumar1*
1Department of Biotechnology, Mizoram University, Aizawl-796004, Mizoram, India
2Department of Zoology, Kumaun University, Nainital-263002, Uttarakhand, India
*Corresponding Author : Nachimuthu Senthil Kumar
Department of Biotechnology
Mizoram University, Aizawl-796004, Mizoram, India
Tel: +91-9436352574
Email: [email protected]
Received: October 13, 2015 Accepted: Novmber 30, 2015 Published: December 03, 2015
Citation: De Mandal S, Panda AK, Bisht SS, Kumar NS (2015) Microbial Ecology in the Era of Next Generation Sequencing. Next Generat Sequenc & Applic S1:001. doi:10.4172/2469-9853.S1-001
Copyright: © 2015 De Mandal S, et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Abstract

Microorganisms are the major part of earth’s biological diversity. Due to most of the microbes being nonculturable, it is necessary to use culture independent techniques to study the uncultured microbes. Metagenomics is the molecular tool which helps to understand the genetic makeup of the wide variety of uncultivable microorganisms. Currently, Next Generation Sequencing (NGS) is one of the most advanced technologies used in metagenomics studies and different computational tools have been developed for the analysis of large metagenomic dataset. This review demonstrates the different tools used in NGS analysis and its applications in microbial ecology.

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