alexa Parallelization of Biological Gene Sequencing Technique with Optimized Smith Waterman Algorithm
ISSN ONLINE(2320-9801) PRINT (2320-9798)

International Journal of Innovative Research in Computer and Communication Engineering
Open Access

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Research Article

Parallelization of Biological Gene Sequencing Technique with Optimized Smith Waterman Algorithm

Ananth Prabhu G1, Dr. Ganesh Aithal2
  1. Assistant Professor, Dept of CS&E, Sahyadri College of Engineering & Management, Mangalore, India
  2. Professor, HOD CS&E, P.A. College of Engineering, Mangalore, India
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Abstract

The presented research work represent a highly robust and efficient parallel computing system development for biological gene sequencing. In this research work, the existing approaches has optimized the most optimum approach available till date in the form of Smithy Waterman algorithm for gene alignment or local gene sequencing. This paper mainly emphasizes on the system development for a traceback assisted optimum diagonal sequencing approach developed with optimized smith Waterman and Myers and Millers techniques. Considering optimization approaches it can be firmly stated that the presented work not only enhances the competing efficiency but also facilitates higher optimum memory occupancy for huge data sets and pattern possibilities.

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