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Phylogenetic and Taxonomic Analyses of <em>Rhodopirellula caenicola</em> Sp. Nov., a New Marine <em>Planctomycetes</em> Species Isolated from Iron Sand | Abstract
ISSN: 2329-9002

Journal of Phylogenetics & Evolutionary Biology
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Research Article

Phylogenetic and Taxonomic Analyses of Rhodopirellula caenicola Sp. Nov., a New Marine Planctomycetes Species Isolated from Iron Sand

Jaewoo Yoon1*, Yoshihide Matsuo2, Hiroaki Kasai3 and Myung-Ki Lee4
1College of Pharmacy, Keimyung University, 1095 Dalgubeoldaero, Dalseo-Gu, Daegu 704-701, Republic of Korea
2Marine Biotechnology Institute, 3-75-1 Heita, Kamaishi, Iwate 026-0001, Japan
3Marine Biosciences, Kamaishi Research Laboratory, Kitasato University, 160-4 Utou, Okirai, Sanriku-cho, Ofunato, Iwate 022-0101, Japan
4Fermentation and Functionality Research Group, Korea Food Research Institute, 516 Baekhyun-dong, Bundang-gu, Sungnam-si, Gyeonggi-do 463-746, Republic of Korea
Corresponding Author : Jaewoo Yoon
College of Pharmacy, Keimyung University
1095 Dalgubeoldaero, Dalseo-Gu
Daegu 704-701, Republic of Korea
Tel: +82-53-580-6648
Fax: +82-53-580-6645
E-mail: [email protected]
Received January 23, 2014; Accepted February 09, 2014; Published February 17, 2014
Citation: Yoon J, Matsuo Y, Kasai H (2015) Phylogenetic and Taxonomic Analyses of Rhodopirellula caenicola Sp. Nov., a New Marine Planctomycetes Species Isolated from Iron Sand. J Phylogen Evolution Biol 3:143. doi: 10.4172/2329-9002.1000143
Copyright: © 2015 Yoon J et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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Abstract

A Gram-negative, strictly aerobic, pink-pigmented, non-motile, spherical bacterium designated YM26-125T was isolated from iron sand. Phylogenetic analyses based on the 16S rRNA gene sequence indicated that the new strain was affiliated with the phylum Planctomycetes and shared 96.1% sequence similarity with Rhodopirellula baltica SH 1T. The strain could be also differentiated phenotypically from the Rhodopirellula baltica SH 1T. The major fatty acids of strain YM26-125T were identified as C16:0 and C18:1 ω9c as defined by the MIDI system. Amino acid analysis of cell wall hydrolysates indicated that the novel isolate did not contain diaminopimelic acid in their cell walls. The DNA G+C content was determined to be 57.5 mol%, the major respiratory quinone was identified as menaquinone 6 (MK-6) and a polar lipid profile was present consisting of a phosphatidylglycerol, a diphosphatidylglycerol and three unidentified phospholipids. From the distinct phylogenetic position and combination of genotypic and phenotypic characteristics, the strain is considered to represent a novel species for which the name Rhodopirellula caenicola sp. nov. is proposed. The type strain of R. caenicola is YM26-125T (=KCTC 32995T=NBRC 110016T).

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