Biology and Medicine

Taxonomic diversity of cucurbit seed associated endophytes

2^nd World Congress on Beneficial Microbes: Food, Pharma, Aqua & Beverages Industry

September 22-24, 2016 Phoenix, USA

Eman M Khalaf and Manish N Raizada

University of Guelph, Canada
Damanhour University, Egypt

Scientific Tracks Abstracts: Biol Med (Aligarh)

Abstract:

Endophytes are potentially beneficial microbes that live inside plants and can be utilized as biofertilizers and biocontrol agents by promoting plant growth and/or suppressing phytopathogens. Few endophytes have previously been isolated from the cucurbit plant family which includes economically important crops including watermelon, cucumber, cantaloupe, pumpkin and squash. In the present study, 169 bacterial endophytes and 10 fungal endophytes were isolated from seeds of different varieties of diverse cucurbits; the most comprehensive characterization of endophytes from this plant family. 16S rDNA and internal transcribed spacers (ITS4 and ITS1F) fingerprinting were used to taxonomically classify the isolated bacteria and fungi, respectively. Phylogenetic analysis of bacterial isolates showed Bacilli was the most abundant class including six different bacterial families. The γ-proteobacteria and Actinobacteria were also represented in four different families. Bacillus was the core microbiota that was conserved across tested cucurbits genera. Strains of the genus Paenibacillus were exclusively isolated from Cucumis sativus L, Cucumis melo L and Cucurbita pepo L. var pepo L. Three different genera of lactic acid bacteria (LAB) were recovered from C. sativus L, C. melo L., Citrullus lanatus var. lanatus and Cucurbita pepo L var. turbinata. Our results suggest co-evolution of seed microbial consortia with their host plants. We now propose to test these novel endophytic microbial strains for their ability to suppress important fungal and bacterial pathogens of the cucurbit family.

Biography :

Eman M Khalaf has completed her BSc and PhD from Pharmacy School, Mansoura University, Egypt. She is presently working as a Lecturer of Microbiology, Pharmacy School, Damanhour University, Egypt. She has spent two years as a Postdoctoral fellow in Raizada Lab (Beneficial Microbes Lab), University of Guelph, Canada.

Email: ekhalaf@uoguelph.ca