alexa Computer-derived nuclear features distinguish malignant from benign breast cytology.
Bioinformatics & Systems Biology

Bioinformatics & Systems Biology

Journal of Theoretical and Computational Science

Author(s): Wolberg WH, Street WN, Heisey DM, Mangasarian OL

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Abstract This article describes the use of computer-based analytical techniques to define nuclear size, shape, and texture features. These features are then used to distinguish between benign and malignant breast cytology. The benign and malignant cell samples used in this study were obtained by fine needle aspiration (FNA) from a consecutive series of 569 patients: 212 with cancer and 357 with fibrocystic breast masses. Regions of FNA preparations to be analyzed were converted by a video camera to computer files that were displayed on a computer monitor. Nuclei to be analyzed were roughly outlined by an operator using a mouse. Next, the computer generated a "snake" that precisely enclosed each designated nucleus. The computer calculated 10 features for each nucleus. The ability to correctly classify samples as benign or malignant on the basis of these features was determined by inductive machine learning and logistic regression. Cross-validation was used to test the validity of the predicted diagnosis. The logistic regression cross validated classification accuracy was 96.2\% and the inductive machine learning cross-validated classification accuracy was 97.5\%. Our computerized system provides a probability that a sample is malignant. Should this probability fall between 30\% and 70\%, the sample is considered "suspicious," in the same way a visually graded FNA may be termed suspicious. All of the 128 consecutive cases obtained since the introduction of this system were correctly diagnosed, but nine benign aspirates fell into the suspicious category.(ABSTRACT TRUNCATED AT 250 WORDS)
This article was published in Hum Pathol and referenced in Journal of Theoretical and Computational Science

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