alexa Detecting novel associations in large data sets
Bioinformatics & Systems Biology

Bioinformatics & Systems Biology

Journal of Data Mining in Genomics & Proteomics

Author(s): David N Reshef, Yakir A Reshef, Hilary K Finucane, Sharon R Grossman, Gilean McVean, Peter J Turnbaugh, Eric S Lander, Michael Mitzenmacher, Pardis C Sabeti

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Identifying interesting relationships between pairs of variables in large data sets is increasingly important. Here, we present a measure of dependence for two-variable relationships: the maximal information coefficient (MIC). MIC captures a wide range of associations both functional and not, and for functional relationships provides a score that roughly equals the coefficient of determination (R2) of the data relative to the regression function. MIC belongs to a larger class of maximal information-based nonparametric exploration (MINE) statistics for identifying and classifying relationships. We apply MIC and MINE to data sets in global health, gene expression, major-league baseball, and the human gut microbiota and identify known and novel relationships.

This article was published in Science and referenced in Journal of Data Mining in Genomics & Proteomics

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