Network parameters Average value Name of molecules
In-degree 1.97 NOTCH1, NOTCH2, NOTCH3, NOTCH4, GAMMA_SECRETASE, NICD1, NICD2, NICD3, NICD4, NOTCH1_PRE, NOTCH2_PRE, NOTCH3_PRE, NOTCH4_PRE, NUC_NICD1, NUC_NICD2, NUC_NICD3, NUC_NICD4, CSL, COA, SMRT, COR, HDAC, YY1, STAT3
Out-degree 1.97 JAG1, JAG2, DLL1, DLL4, DLL3, TACE, GAMMA_SECRETASE, DVL, POGLUT1, O_GLUCOSE, POFUT_1, O_FUCOSE, XYLE, XYL, GASE, GALACTOSE, FRINGE, NGA, GSK_3BETA, P53_P, NUC_NICD1, NUC_NICD2, NUC_NICD3, NUC_NICD4, CSL, DTX1, FBW7, SKIP, CDK8, HIF1A, HES1, NRARP
Total-degree 3.94 NOTCH1, NOTCH2, NOTCH3, NOTCH4, GAMMA_SECRETASE, NICD1, NICD2, NICD3, NICD4, NOTCH1_PRE, NOTCH2_PRE, POGLUT1, O_GLUCOSE, NOTCH3_PRE, NOTCH4_PRE, POFUT_1, O_FUCOSE, XYLE, XYL, GASE, GALACTOSE, FRINGE, NGA, P53_P, NUC_NICD1, NUC_NICD2, NUC_NICD3, NUC_NICD4, CSL, COA, SMRT, COR, HDAC, CDK8, YY1, HIF1A, NRARP
Eigenvector centrality 0.20 NICD1, NICD2, NICD3, NICD4, NOTCH1_PRE, NOTCH2_PRE, NOTCH3_PRE, NOTCH4_PRE, NUC_NICD1, COA, HAT, SMRT, COR, HDAC, YY1, HES1, STAT3, HES5, JAK2, HEY1, HEY2, MAG, NRARP, NFKB, MYOD, GATA3, CD44, P21, KLF5, PTCRA, REL_B, C_REL, P50, P65, SOX9, BCL2, IAP, FLIP, CCND1, CCND3, MKP_1, HEYL, HES7
Closeness centrality 0.002 JAG1, NOTCH1, JAG2, DLL1, DLL4, DLL3, NOTCH2, NOTCH3, NOTCH4, MAGP1, MAGP2, TACE, NOV, CNTN1, PRESENILIN1, GAMMA_SECRETASE, APH1, NICASTRIN, PEN2, NEXT1, NEXT2, NEXT3, NEXT4, NICD1, NICD2, NICD3, NICD4, DVL, WDR12, GSK_3BETA, JIP1, RAS, P53, P53_P, NUC_NICD1, NUC_NICD2, NUC_NICD3, NUC_NICD4, SMAD3, CSL, DTX1, FBW7, EP300, COA, SKIP, HAT, MAML, SMRT, COR, SAP30, HDAC, CIR, SIN3A, CDK8, STAT3_P, NUC_STAT3, HIF1A, HES1, STAT3, HES5, JAK2, NRARP
Betweenness centrality 107.94 NOTCH1, NOTCH2, GAMMA_SECRETASE, NEXT1, NEXT2, NEXT3, NEXT4, NICD1, NICD2, NICD3, NICD4, NUC_NICD1, NUC_NICD2, NUC_NICD3, NUC_NICD4, CSL, COA, COR, STAT3_P, NUC_STAT3, HIF1A, HES1, STAT3, HES5, NRARP, PTEN
Table 1: Extracted significant proteins of notch signaling pathway which have higher parameter values than the corresponding average values.
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