SNPs Number of genotypes Common HMZ HTZ Rare HMZ MAF HWE p-values rs10845306 1792 862 761 169 0.47 0.96 rs79302630 1867 1608 248 11 0.07 0.67 rs10772428 1806 867 769 170 0.31 0.98 rs11054195 1873 1721 148 4 0.04 0.66 rs4883264 1833 1045 678 110 0.24 1.00 rs4883263 1870 1764 102 4 0.03 0.05 rs7980201 1848 1513 320 15 0.09 0.67 rs76573683 1858 1609 239 10 0.07 0.73 rs10743939 1825 1046 680 99 0.24 0.40 rs61729512 1838 1384 386 68 0.14 0.00 rs11054072 1775 491 911 373 0.47 0.19

Abbreviations: SNP, single nucleotide polymorphism; HMZ, homozygotes; HTZ, heterozygotes; MAF, minor allele frequency; HWE, Hardy-Weinberg equilibrium.

Table 3: Genotype distribution of selected tagging SNPs in the whole cohort.

Goto home»