AFLP1 AFLP2 AFLP3
With all loci
FST 0.2316* 0.1610* 0.1010*
Standardized PPS 0 0.1667 0.1287
Reassignment rate 90.47 % 74. 42 % 43.14 %
Without loci detected as under positive selection
Detected outlier loci 12 (2.02 %) 18 (5.16 %) 4 (2.50 %)
FST 0.2141* 0.1501* 0.0884*
Standardized PPS 0 0.1905 0.1862
Reassignment rates 90.48 % 76.74 % 22.55 %
*p-value < 0.001
Table 3: Results of the different AFLP performed in this study. Partition of the genetic diversity (FST), standardized parsimony scores (PPS), and reassignment rate are given over all loci and without loci presumably under positive selection (outlier loci detected with the Mcheza software).
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