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Scalable SNP Analyses of 100+ Bacterial or Viral Genomes
With the flood of whole genome finished and draft microbial sequences, analysts need faster, more scalable bioinformatics tools for sequence comparison. An algorithm is described to find single nucleotide polymorphisms (SNPs) in whole genome data. It scales to hundreds of bacterial or viral genomes, and can be used for finished and/ or draft genomes available as unassembled contigs.
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